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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:26.5 nTPM
HPA:26.5 nTPM
GTEx:18.7 nTPM
FANTOM5:71.3 Scaled Tags Per Million
Pig:38.1 nTPM
Mouse:28.3 nTPM
Allen mouse:2.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020862Antibody HPA023891
Glial cells MediumNot detected
Neuronal cells HighMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.5
Sample id Sample description nTPM
Hippocampus
nTPM: 17.9
2529 Female, age 94, left hemisphere 24.3
1898 Male, age 80, left hemisphere 17.8
2148 Female, age 91, left hemisphere 17.8
1911 Female, age 85, right hemisphere 17.7
2621 Female, age 67, right hemisphere 17.6
1855 Male, age 76, left hemisphere 12.4
Dentate gyrus
nTPM: 17.0
1927 Female, age 91, both hemispheres 24.1
2528 Male, age 74, both hemispheres 22.5
2531 Female, age 67, both hemispheres 17.4
2246 Female, age 85, both hemispheres 15.2
2010 Male, age 76, both hemispheres 11.7
2530 Female, age 94, left hemisphere 11.1
Entorhinal gyrus
nTPM: 18.2
1938 Female, age 85, left hemisphere 22.1
2764 Male, age 80, right hemisphere 21.7
1787 Male, age 76, left hemisphere 18.7
2117 Female, age 91, right hemisphere 17.6
2613 Female, age 94, left hemisphere 15.4
2686 Male, age 75, right hemisphere 13.9
Hippocampus, CA1
nTPM: 19.4
2527 Male, age 74, both hemispheres 24.3
1873 Female, age 85, both hemispheres 20.5
2082 Female, age 91, right hemisphere 18.2
2749 Male, age 80, left hemisphere 18.2
2045 Male, age 76, both hemispheres 16.1
Hippocampus, CA2
nTPM: 19.1
2249 Male, age 74, both hemispheres 24.8
2113 Female, age 91, right hemisphere 23.4
1963 Male, age 80, left hemisphere 23.3
1892 Male, age 76, both hemispheres 15.2
1940 Female, age 85, left hemisphere 14.4
2437 Female, age 94, left hemisphere 13.2
Hippocampus, CA3
nTPM: 20.0
2436 Male, age 74, both hemispheres 30.9
2137 Male, age 80, left hemisphere 23.3
1891 Female, age 85, both hemispheres 19.6
2620 Female, age 94, left hemisphere 19.4
1867 Male, age 76, both hemispheres 15.3
2861 Female, age 67, both hemispheres 11.6
Parahippocampal cortex
nTPM: 22.1
1850 Male, age 80, both hemispheres 26.9
1933 Female, age 85, both hemispheres 25.7
2245 Female, age 91, both hemispheres 24.2
2250 Female, age 67, right hemisphere 23.7
2692 Male, age 74, both hemispheres 22.3
2532 Female, age 72, left hemisphere 22.0
2622 Female, age 67, right hemisphere 21.6
1990 Female, age 91, right hemisphere 21.1
2693 Female, age 94, both hemispheres 18.4
2018 Male, age 76, both hemispheres 15.1
Perirhinal gyrus
nTPM: 26.5
1841 Female, age 85, right hemisphere 31.4
1794 Male, age 80, right hemisphere 31.3
1847 Female, age 91, left hemisphere 24.4
2521 Female, age 94, right hemisphere 22.9
2848 Male, age 76, right hemisphere 22.4
Subiculum
nTPM: 19.5
2619 Male, age 74, both hemispheres 26.9
2438 Female, age 94, left hemisphere 20.9
1977 Female, age 85, both hemispheres 19.9
1901 Male, age 80, both hemispheres 17.8
2729 Female, age 91, right hemisphere 16.5
2042 Male, age 76, both hemispheres 15.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.7
Samples: 197

Max nTPM: 38.0
Min nTPM: 7.0
Std nTPM: 5.1
Median nTPM: 17.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 38.0
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 35.4
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 35.4
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 30.4
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 30.4
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 29.2
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 29.0
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 29.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 28.7
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 28.6
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 28.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 71.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 71.3
FF:10153-102I9 76 years, female 111.3
FF:10169-103B7 60 years, female 31.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 38.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 29.1
Samples: 4

Max nTPM: 33.7
Min nTPM: 22.4
Sample A Female 31.4
Sample B Female 29.0
Sample C Male 33.7
Sample D Male 22.4
Entorhinal cortex
nTPM: 38.1
Samples: 4

Max nTPM: 39.6
Min nTPM: 36.3
Sample A Female 36.3
Sample B Female 38.5
Sample C Male 37.8
Sample D Male 39.6
Subiculum
nTPM: 36.9
Samples: 4

Max nTPM: 40.6
Min nTPM: 32.8
Sample A Female 40.6
Sample B Female 37.3
Sample C Male 36.9
Sample D Male 32.8
Ventral hippocampus
nTPM: 29.8
Samples: 4

Max nTPM: 31.6
Min nTPM: 27.8
Sample A Female 27.8
Sample B Female 29.0
Sample C Male 30.6
Sample D Male 31.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 28.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.3
Samples: 4

Max nTPM: 30.1
Min nTPM: 24.7
Sample A Male 30.1
Sample B Male 29.5
Sample C Female 24.7
Sample D Female 28.9
Hippocampal formation
nTPM: 21.8
Samples: 4

Max nTPM: 23.3
Min nTPM: 18.5
Sample A Male 23.3
Sample B Male 22.7
Sample C Female 22.7
Sample D Female 18.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.6
69514452 Antisense, RP_050419_03_D03, Mouse strain C57BL/6J (56 days, male) 2.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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