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CCNL1
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:13.0 nTPM
HPA:13.0 nTPM
GTEx:13.9 nTPM
FANTOM5:86.1 Scaled Tags Per Million
Pig:25.7 nTPM
Mouse:4.5 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.0
Sample id Sample description nTPM
Hippocampus
nTPM: 12.3
2148 Female, age 91, left hemisphere 13.0
2529 Female, age 94, left hemisphere 12.9
1911 Female, age 85, right hemisphere 12.3
1855 Male, age 76, left hemisphere 12.0
2621 Female, age 67, right hemisphere 12.0
1898 Male, age 80, left hemisphere 11.3
Dentate gyrus
nTPM: 12.1
1927 Female, age 91, both hemispheres 13.4
2531 Female, age 67, both hemispheres 12.3
2246 Female, age 85, both hemispheres 12.1
2530 Female, age 94, left hemisphere 11.8
2528 Male, age 74, both hemispheres 11.5
2010 Male, age 76, both hemispheres 11.4
Entorhinal gyrus
nTPM: 12.0
2117 Female, age 91, right hemisphere 12.9
1938 Female, age 85, left hemisphere 12.1
2764 Male, age 80, right hemisphere 12.1
1787 Male, age 76, left hemisphere 11.8
2686 Male, age 75, right hemisphere 11.6
2613 Female, age 94, left hemisphere 11.3
Hippocampus, CA1
nTPM: 12.1
2527 Male, age 74, both hemispheres 12.9
1873 Female, age 85, both hemispheres 12.5
2045 Male, age 76, both hemispheres 12.2
2082 Female, age 91, right hemisphere 11.7
2749 Male, age 80, left hemisphere 11.2
Hippocampus, CA2
nTPM: 12.0
1940 Female, age 85, left hemisphere 12.3
2249 Male, age 74, both hemispheres 12.3
2113 Female, age 91, right hemisphere 12.2
1963 Male, age 80, left hemisphere 12.1
1892 Male, age 76, both hemispheres 11.9
2437 Female, age 94, left hemisphere 11.4
Hippocampus, CA3
nTPM: 12.0
1867 Male, age 76, both hemispheres 12.8
2861 Female, age 67, both hemispheres 12.4
1891 Female, age 85, both hemispheres 12.1
2620 Female, age 94, left hemisphere 11.9
2137 Male, age 80, left hemisphere 11.5
2436 Male, age 74, both hemispheres 11.2
Parahippocampal cortex
nTPM: 11.9
2245 Female, age 91, both hemispheres 13.4
2692 Male, age 74, both hemispheres 12.4
1933 Female, age 85, both hemispheres 12.2
1990 Female, age 91, right hemisphere 12.2
2532 Female, age 72, left hemisphere 12.1
2250 Female, age 67, right hemisphere 11.8
2622 Female, age 67, right hemisphere 11.5
2693 Female, age 94, both hemispheres 11.4
1850 Male, age 80, both hemispheres 11.3
2018 Male, age 76, both hemispheres 11.2
Perirhinal gyrus
nTPM: 11.5
1841 Female, age 85, right hemisphere 12.1
2848 Male, age 76, right hemisphere 12.0
2521 Female, age 94, right hemisphere 11.2
1794 Male, age 80, right hemisphere 11.0
1847 Female, age 91, left hemisphere 11.0
Subiculum
nTPM: 13.0
2042 Male, age 76, both hemispheres 14.7
2438 Female, age 94, left hemisphere 14.0
2619 Male, age 74, both hemispheres 13.0
1977 Female, age 85, both hemispheres 12.6
1901 Male, age 80, both hemispheres 12.1
2729 Female, age 91, right hemisphere 11.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.9
Samples: 197

Max nTPM: 50.1
Min nTPM: 3.2
Std nTPM: 6.8
Median nTPM: 12.2
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 50.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 46.6
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 35.1
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 32.2
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 30.3
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 27.2
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 26.3
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 25.2
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 25.1
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 24.1
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 23.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 86.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 86.1
FF:10169-103B7 60 years, female 93.1
FF:10153-102I9 76 years, female 79.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 25.3
Samples: 4

Max nTPM: 30.1
Min nTPM: 23.1
Sample A Female 23.1
Sample B Female 23.2
Sample C Male 30.1
Sample D Male 24.9
Entorhinal cortex
nTPM: 24.7
Samples: 4

Max nTPM: 26.6
Min nTPM: 23.1
Sample A Female 25.4
Sample B Female 23.1
Sample C Male 26.6
Sample D Male 23.5
Subiculum
nTPM: 25.7
Samples: 4

Max nTPM: 28.1
Min nTPM: 23.1
Sample A Female 23.1
Sample B Female 24.4
Sample C Male 27.3
Sample D Male 28.1
Ventral hippocampus
nTPM: 24.3
Samples: 4

Max nTPM: 25.5
Min nTPM: 23.4
Sample A Female 23.9
Sample B Female 25.5
Sample C Male 23.4
Sample D Male 24.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 4.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.1
Samples: 4

Max nTPM: 5.5
Min nTPM: 1.8
Sample A Male 5.2
Sample B Male 5.5
Sample C Female 1.8
Sample D Female 3.8
Hippocampal formation
nTPM: 4.5
Samples: 4

Max nTPM: 5.8
Min nTPM: 2.9
Sample A Male 5.7
Sample B Male 5.8
Sample C Female 3.5
Sample D Female 2.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.