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SLBP
AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:38.6 nTPM
HPA:38.6 nTPM
GTEx:35.5 nTPM
FANTOM5:47.9 Scaled Tags Per Million
Mouse:22.3 nTPM
Allen mouse:1.5 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 38.6
Sample id Sample description nTPM
Amygdala
nTPM: 36.1
2517 Female, age 94, left hemisphere 39.1
1987 Female, age 91, left hemisphere 37.5
2514 Male, age 75, right hemisphere 35.5
2814 Male, age 76, right hemisphere 35.2
2695 Female, age 67, right hemisphere 33.0
Basal amygdala
nTPM: 36.5
2243 Female, age 91, right hemisphere 38.8
2110 Male, age 80, left hemisphere 38.0
2685 Female, age 94, left hemisphere 37.7
1955 Male, age 76, both hemispheres 37.3
2609 Male, age 75, right hemisphere 35.7
2827 Female, age 67, right hemisphere 31.5
Central amygdala
nTPM: 36.5
2826 Female, age 94, left hemisphere 40.2
2239 Male, age 80, left hemisphere 39.1
1905 Male, age 76, both hemispheres 34.6
2515 Male, age 75, right hemisphere 34.5
2701 Female, age 91, right hemisphere 34.2
Corticomedial amygdala
nTPM: 36.7
2829 Male, age 80, left hemisphere 39.9
2242 Female, age 91, right hemisphere 38.8
2240 Male, age 76, both hemispheres 36.2
2535 Female, age 67, right hemisphere 36.1
2429 Female, age 94, left hemisphere 34.8
2428 Male, age 75, right hemisphere 34.4
Lateral amygdala
nTPM: 35.5
2534 Female, age 94, left hemisphere 38.7
1883 Male, age 76, both hemispheres 36.7
2256 Male, age 80, left hemisphere 35.1
2255 Female, age 91, right hemisphere 34.9
2516 Male, age 75, right hemisphere 34.7
2830 Female, age 67, right hemisphere 32.8
Stria terminalis, bed nucleus
nTPM: 38.6
1974 Female, age 91, both hemispheres 41.0
2201 Male, age 74, unknown 38.2
2486 Female, age 94, both hemispheres 36.7

AMYGDALA - GTEx RNA-seqi
Average nTPM 35.5
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 35.5
Samples: 152

Max nTPM: 82.6
Min nTPM: 18.0
Std nTPM: 10.6
Median nTPM: 33.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 82.6
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 64.8
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 62.3
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 60.7
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 59.7
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 59.1
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 58.7
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 57.1
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 55.3
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 55.2
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 54.5
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 47.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 47.9
FF:10151-102I7 76 years, female 47.9

AMYGDALA - Mouse RNA-seqi
Average nTPM 22.3
Mouse sample Sample description nTPM
Amygdala
nTPM: 22.4
Samples: 4

Max nTPM: 24.0
Min nTPM: 21.0
Sample A Male 22.0
Sample B Male 24.0
Sample C Female 21.0
Sample D Female 22.4

AMYGDALA - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 1.5
68546434 Antisense, RP_050120_02_E03, Mouse strain C57BL/6J (56 days, male) 1.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.