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TEX264
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:43.8 nTPM
HPA:43.8 nTPM
GTEx:32.7 nTPM
FANTOM5:22.5 Scaled Tags Per Million
Pig:10.5 nTPM
Mouse:80.7 nTPM
Allen mouse:7.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017739Antibody CAB005002
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 43.8
Sample id Sample description nTPM
Hippocampus
nTPM: 42.5
1911 Female, age 85, right hemisphere 43.4
2621 Female, age 67, right hemisphere 43.2
1898 Male, age 80, left hemisphere 42.8
1855 Male, age 76, left hemisphere 42.1
2529 Female, age 94, left hemisphere 41.9
2148 Female, age 91, left hemisphere 41.4
Dentate gyrus
nTPM: 41.9
2528 Male, age 74, both hemispheres 44.8
2246 Female, age 85, both hemispheres 42.5
2530 Female, age 94, left hemisphere 42.4
1927 Female, age 91, both hemispheres 41.7
2010 Male, age 76, both hemispheres 41.0
2531 Female, age 67, both hemispheres 39.1
Entorhinal gyrus
nTPM: 43.8
2613 Female, age 94, left hemisphere 45.5
1938 Female, age 85, left hemisphere 44.7
2117 Female, age 91, right hemisphere 44.6
2764 Male, age 80, right hemisphere 44.2
1787 Male, age 76, left hemisphere 43.6
2686 Male, age 75, right hemisphere 40.0
Hippocampus, CA1
nTPM: 42.1
2527 Male, age 74, both hemispheres 42.9
2082 Female, age 91, right hemisphere 42.3
1873 Female, age 85, both hemispheres 42.2
2749 Male, age 80, left hemisphere 41.7
2045 Male, age 76, both hemispheres 41.6
Hippocampus, CA2
nTPM: 43.4
2249 Male, age 74, both hemispheres 47.4
1892 Male, age 76, both hemispheres 43.5
2113 Female, age 91, right hemisphere 42.6
1940 Female, age 85, left hemisphere 42.5
2437 Female, age 94, left hemisphere 42.3
1963 Male, age 80, left hemisphere 42.1
Hippocampus, CA3
nTPM: 42.6
2436 Male, age 74, both hemispheres 48.0
1891 Female, age 85, both hemispheres 42.8
1867 Male, age 76, both hemispheres 42.7
2620 Female, age 94, left hemisphere 41.5
2137 Male, age 80, left hemisphere 41.0
2861 Female, age 67, both hemispheres 39.8
Parahippocampal cortex
nTPM: 42.0
1933 Female, age 85, both hemispheres 43.4
1990 Female, age 91, right hemisphere 42.9
2250 Female, age 67, right hemisphere 42.9
1850 Male, age 80, both hemispheres 42.6
2532 Female, age 72, left hemisphere 42.3
2245 Female, age 91, both hemispheres 41.7
2692 Male, age 74, both hemispheres 41.4
2693 Female, age 94, both hemispheres 41.3
2018 Male, age 76, both hemispheres 40.9
2622 Female, age 67, right hemisphere 40.3
Perirhinal gyrus
nTPM: 42.6
1847 Female, age 91, left hemisphere 43.8
1794 Male, age 80, right hemisphere 43.6
1841 Female, age 85, right hemisphere 42.2
2848 Male, age 76, right hemisphere 42.1
2521 Female, age 94, right hemisphere 41.3
Subiculum
nTPM: 42.1
2619 Male, age 74, both hemispheres 43.5
1977 Female, age 85, both hemispheres 42.6
1901 Male, age 80, both hemispheres 42.5
2729 Female, age 91, right hemisphere 42.0
2438 Female, age 94, left hemisphere 41.1
2042 Male, age 76, both hemispheres 40.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.7
Samples: 197

Max nTPM: 51.9
Min nTPM: 19.1
Std nTPM: 5.3
Median nTPM: 33.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 51.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 47.8
GTEX-1EKGG-0011-R1b-SM-9QEI1 60-69 years, male 47.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 47.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 47.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 46.1
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 45.0
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 43.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 42.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 42.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 41.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.5
FF:10169-103B7 60 years, female 25.1
FF:10153-102I9 76 years, female 20.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.5
Samples: 4

Max nTPM: 13.4
Min nTPM: 8.3
Sample A Female 13.4
Sample B Female 10.2
Sample C Male 9.9
Sample D Male 8.3
Entorhinal cortex
nTPM: 7.5
Samples: 4

Max nTPM: 8.8
Min nTPM: 6.0
Sample A Female 7.6
Sample B Female 7.5
Sample C Male 8.8
Sample D Male 6.0
Subiculum
nTPM: 8.2
Samples: 4

Max nTPM: 10.1
Min nTPM: 7.4
Sample A Female 10.1
Sample B Female 7.5
Sample C Male 7.9
Sample D Male 7.4
Ventral hippocampus
nTPM: 9.7
Samples: 4

Max nTPM: 12.4
Min nTPM: 7.3
Sample A Female 9.4
Sample B Female 7.3
Sample C Male 12.4
Sample D Male 9.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 80.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 80.7
Samples: 4

Max nTPM: 96.6
Min nTPM: 73.8
Sample A Male 73.8
Sample B Male 75.4
Sample C Female 77.0
Sample D Female 96.6
Hippocampal formation
nTPM: 77.2
Samples: 4

Max nTPM: 80.4
Min nTPM: 73.2
Sample A Male 73.2
Sample B Male 76.1
Sample C Female 79.2
Sample D Female 80.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.6
77620381 Antisense, RP_070205_01_E02, Mouse strain C57BL/6J (56 days, male) 7.6

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