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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:366.2 nTPM
HPA:366.2 nTPM
GTEx:334.2 nTPM
FANTOM5:467.5 Scaled Tags Per Million
Pig:658.2 nTPM
Mouse:721.0 nTPM
Allen mouse:16.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB005065
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 366.2
Sample id Sample description nTPM
Hippocampus
nTPM: 236.4
1898 Male, age 80, left hemisphere 391.0
1855 Male, age 76, left hemisphere 258.5
2621 Female, age 67, right hemisphere 240.2
1911 Female, age 85, right hemisphere 203.0
2148 Female, age 91, left hemisphere 181.9
2529 Female, age 94, left hemisphere 143.6
Dentate gyrus
nTPM: 237.4
2010 Male, age 76, both hemispheres 316.1
1927 Female, age 91, both hemispheres 311.2
2246 Female, age 85, both hemispheres 280.1
2531 Female, age 67, both hemispheres 183.7
2528 Male, age 74, both hemispheres 172.2
2530 Female, age 94, left hemisphere 161.0
Entorhinal gyrus
nTPM: 222.6
2764 Male, age 80, right hemisphere 283.8
1938 Female, age 85, left hemisphere 277.9
1787 Male, age 76, left hemisphere 228.7
2613 Female, age 94, left hemisphere 220.6
2117 Female, age 91, right hemisphere 166.9
2686 Male, age 75, right hemisphere 157.7
Hippocampus, CA1
nTPM: 328.6
2749 Male, age 80, left hemisphere 547.5
1873 Female, age 85, both hemispheres 303.5
2045 Male, age 76, both hemispheres 291.2
2082 Female, age 91, right hemisphere 257.2
2527 Male, age 74, both hemispheres 243.7
Hippocampus, CA2
nTPM: 251.1
1892 Male, age 76, both hemispheres 342.7
1963 Male, age 80, left hemisphere 322.9
1940 Female, age 85, left hemisphere 242.4
2249 Male, age 74, both hemispheres 220.8
2113 Female, age 91, right hemisphere 219.8
2437 Female, age 94, left hemisphere 157.8
Hippocampus, CA3
nTPM: 254.8
2137 Male, age 80, left hemisphere 416.0
1867 Male, age 76, both hemispheres 283.7
2620 Female, age 94, left hemisphere 251.5
2436 Male, age 74, both hemispheres 215.3
1891 Female, age 85, both hemispheres 196.6
2861 Female, age 67, both hemispheres 165.6
Parahippocampal cortex
nTPM: 254.3
1850 Male, age 80, both hemispheres 337.0
1933 Female, age 85, both hemispheres 318.1
2245 Female, age 91, both hemispheres 313.7
2018 Male, age 76, both hemispheres 301.2
2693 Female, age 94, both hemispheres 271.3
2250 Female, age 67, right hemisphere 267.9
1990 Female, age 91, right hemisphere 233.4
2532 Female, age 72, left hemisphere 220.9
2622 Female, age 67, right hemisphere 152.2
2692 Male, age 74, both hemispheres 127.4
Perirhinal gyrus
nTPM: 366.2
1847 Female, age 91, left hemisphere 447.2
2521 Female, age 94, right hemisphere 394.7
1794 Male, age 80, right hemisphere 376.7
1841 Female, age 85, right hemisphere 347.9
2848 Male, age 76, right hemisphere 264.2
Subiculum
nTPM: 203.4
1977 Female, age 85, both hemispheres 287.0
1901 Male, age 80, both hemispheres 278.5
2042 Male, age 76, both hemispheres 215.2
2729 Female, age 91, right hemisphere 153.7
2619 Male, age 74, both hemispheres 145.6
2438 Female, age 94, left hemisphere 140.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 334.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 334.2
Samples: 197

Max nTPM: 930.2
Min nTPM: 126.2
Std nTPM: 156.8
Median nTPM: 331.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 930.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 759.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 757.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 728.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 723.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 684.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 667.7
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 660.1
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 654.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 650.8
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 644.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 467.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 467.5
FF:10169-103B7 60 years, female 588.0
FF:10153-102I9 76 years, female 347.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 658.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 658.2
Samples: 4

Max nTPM: 861.1
Min nTPM: 512.0
Sample A Female 861.1
Sample B Female 731.7
Sample C Male 528.0
Sample D Male 512.0
Entorhinal cortex
nTPM: 582.1
Samples: 4

Max nTPM: 668.9
Min nTPM: 464.5
Sample A Female 668.9
Sample B Female 652.6
Sample C Male 542.5
Sample D Male 464.5
Subiculum
nTPM: 602.5
Samples: 4

Max nTPM: 802.2
Min nTPM: 491.9
Sample A Female 802.2
Sample B Female 564.3
Sample C Male 491.9
Sample D Male 551.7
Ventral hippocampus
nTPM: 562.9
Samples: 4

Max nTPM: 695.2
Min nTPM: 413.5
Sample A Female 610.7
Sample B Female 413.5
Sample C Male 532.2
Sample D Male 695.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 721.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 706.3
Samples: 4

Max nTPM: 820.8
Min nTPM: 638.6
Sample A Male 638.6
Sample B Male 708.6
Sample C Female 657.2
Sample D Female 820.8
Hippocampal formation
nTPM: 721.0
Samples: 4

Max nTPM: 766.8
Min nTPM: 626.9
Sample A Male 759.2
Sample B Male 766.8
Sample C Female 731.0
Sample D Female 626.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.0
1133 Antisense, RP_Baylor_103130, Mouse strain C57BL/6J (56 days, male) 16.0
1134 Antisense, RP_Baylor_103130, Mouse strain C57BL/6J (56 days, male) 14.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.