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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:201.1 nTPM
HPA:201.1 nTPM
GTEx:199.3 nTPM
FANTOM5:412.6 Scaled Tags Per Million
Pig:149.3 nTPM
Mouse:197.7 nTPM
Allen mouse:2.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027132
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 201.1
Sample id Sample description nTPM
Hippocampus
nTPM: 201.1
2148 Female, age 91, left hemisphere 224.1
1898 Male, age 80, left hemisphere 205.7
2529 Female, age 94, left hemisphere 204.2
1911 Female, age 85, right hemisphere 199.5
2621 Female, age 67, right hemisphere 195.7
1855 Male, age 76, left hemisphere 177.1
Dentate gyrus
nTPM: 192.8
2530 Female, age 94, left hemisphere 203.5
2528 Male, age 74, both hemispheres 201.6
1927 Female, age 91, both hemispheres 194.9
2531 Female, age 67, both hemispheres 190.6
2246 Female, age 85, both hemispheres 184.0
2010 Male, age 76, both hemispheres 182.3
Entorhinal gyrus
nTPM: 180.0
2117 Female, age 91, right hemisphere 201.6
2686 Male, age 75, right hemisphere 187.0
2764 Male, age 80, right hemisphere 180.6
1938 Female, age 85, left hemisphere 178.9
1787 Male, age 76, left hemisphere 170.6
2613 Female, age 94, left hemisphere 161.1
Hippocampus, CA1
nTPM: 194.1
2749 Male, age 80, left hemisphere 224.9
1873 Female, age 85, both hemispheres 197.3
2527 Male, age 74, both hemispheres 197.2
2045 Male, age 76, both hemispheres 186.0
2082 Female, age 91, right hemisphere 164.8
Hippocampus, CA2
nTPM: 185.7
1963 Male, age 80, left hemisphere 207.9
2437 Female, age 94, left hemisphere 192.8
2249 Male, age 74, both hemispheres 189.1
2113 Female, age 91, right hemisphere 181.9
1940 Female, age 85, left hemisphere 175.1
1892 Male, age 76, both hemispheres 167.6
Hippocampus, CA3
nTPM: 189.4
2861 Female, age 67, both hemispheres 222.2
2620 Female, age 94, left hemisphere 194.6
2137 Male, age 80, left hemisphere 194.5
1867 Male, age 76, both hemispheres 182.6
1891 Female, age 85, both hemispheres 182.5
2436 Male, age 74, both hemispheres 159.8
Parahippocampal cortex
nTPM: 182.1
2532 Female, age 72, left hemisphere 194.7
1933 Female, age 85, both hemispheres 192.4
2692 Male, age 74, both hemispheres 189.1
2622 Female, age 67, right hemisphere 188.5
2245 Female, age 91, both hemispheres 185.2
1850 Male, age 80, both hemispheres 179.1
2250 Female, age 67, right hemisphere 175.4
2018 Male, age 76, both hemispheres 175.2
1990 Female, age 91, right hemisphere 174.8
2693 Female, age 94, both hemispheres 166.0
Perirhinal gyrus
nTPM: 173.6
1794 Male, age 80, right hemisphere 191.1
1841 Female, age 85, right hemisphere 187.6
1847 Female, age 91, left hemisphere 167.6
2848 Male, age 76, right hemisphere 162.5
2521 Female, age 94, right hemisphere 159.4
Subiculum
nTPM: 179.8
2729 Female, age 91, right hemisphere 207.6
1901 Male, age 80, both hemispheres 179.8
2042 Male, age 76, both hemispheres 178.6
2619 Male, age 74, both hemispheres 172.6
1977 Female, age 85, both hemispheres 170.5
2438 Female, age 94, left hemisphere 170.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 199.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 199.3
Samples: 197

Max nTPM: 452.9
Min nTPM: 77.8
Std nTPM: 69.0
Median nTPM: 189.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 452.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 450.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 442.5
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 414.1
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 378.7
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 372.5
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 367.7
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 330.2
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 324.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 318.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 314.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 412.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 412.6
FF:10169-103B7 60 years, female 492.8
FF:10153-102I9 76 years, female 332.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 149.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 132.5
Samples: 4

Max nTPM: 164.9
Min nTPM: 113.0
Sample A Female 164.9
Sample B Female 131.4
Sample C Male 120.5
Sample D Male 113.0
Entorhinal cortex
nTPM: 137.7
Samples: 4

Max nTPM: 173.0
Min nTPM: 109.5
Sample A Female 114.6
Sample B Female 173.0
Sample C Male 153.6
Sample D Male 109.5
Subiculum
nTPM: 149.3
Samples: 4

Max nTPM: 187.7
Min nTPM: 115.5
Sample A Female 187.7
Sample B Female 166.2
Sample C Male 115.5
Sample D Male 127.6
Ventral hippocampus
nTPM: 138.5
Samples: 4

Max nTPM: 157.5
Min nTPM: 128.9
Sample A Female 137.5
Sample B Female 129.9
Sample C Male 157.5
Sample D Male 128.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 197.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 197.7
Samples: 4

Max nTPM: 215.4
Min nTPM: 177.6
Sample A Male 215.4
Sample B Male 213.8
Sample C Female 183.9
Sample D Female 177.6
Hippocampal formation
nTPM: 156.9
Samples: 4

Max nTPM: 189.0
Min nTPM: 138.3
Sample A Male 189.0
Sample B Male 150.2
Sample C Female 138.3
Sample D Female 150.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.4
69528040 Antisense, RP_050421_03_A03, Mouse strain C57BL/6J (56 days, male) 3.9
73520964 Antisense, RP_051017_04_E04, Mouse strain C57BL/6J (56 days, male) 0.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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