ABOUTMENU
HELP
NEWS
ALDH1A1
AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		97.619
RNA expressioni
Consensus:51.3 nTPM
HPA:51.3 nTPM
GTEx:48.0 nTPM
FANTOM5:8.6 Scaled Tags Per Million
Pig:8.9 nTPM
Mouse:93.0 nTPM
Allen mouse:0.2 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA002123
Amygdala mean intensity 97.619
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 90.416
Basal medial amygdaloid nucleus 23.117
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 97.619
Cortical amygdala 17.924
Central amygdala 20.062
Medial amygdaloid nucleus 25.484

AMYGDALA - HPA Brain RNA-seq
Max nTPM 51.3
Sample id Sample description nTPM
Amygdala
nTPM: 51.3
2695 Female, age 67, right hemisphere 76.4
2814 Male, age 76, right hemisphere 66.4
2514 Male, age 75, right hemisphere 38.3
2517 Female, age 94, left hemisphere 38.0
1987 Female, age 91, left hemisphere 37.6
Basal amygdala
nTPM: 44.6
1955 Male, age 76, both hemispheres 55.3
2110 Male, age 80, left hemisphere 47.0
2609 Male, age 75, right hemisphere 46.2
2243 Female, age 91, right hemisphere 40.6
2827 Female, age 67, right hemisphere 40.6
2685 Female, age 94, left hemisphere 37.6
Central amygdala
nTPM: 45.1
1905 Male, age 76, both hemispheres 62.5
2826 Female, age 94, left hemisphere 44.4
2239 Male, age 80, left hemisphere 40.9
2515 Male, age 75, right hemisphere 39.8
2701 Female, age 91, right hemisphere 37.8
Corticomedial amygdala
nTPM: 38.6
2240 Male, age 76, both hemispheres 46.1
2428 Male, age 75, right hemisphere 42.8
2829 Male, age 80, left hemisphere 38.5
2535 Female, age 67, right hemisphere 37.4
2429 Female, age 94, left hemisphere 34.9
2242 Female, age 91, right hemisphere 32.2
Lateral amygdala
nTPM: 47.7
1883 Male, age 76, both hemispheres 69.5
2516 Male, age 75, right hemisphere 48.7
2830 Female, age 67, right hemisphere 43.5
2255 Female, age 91, right hemisphere 42.5
2534 Female, age 94, left hemisphere 41.4
2256 Male, age 80, left hemisphere 40.6
Stria terminalis, bed nucleus
nTPM: 37.1
2201 Male, age 74, unknown 40.4
1974 Female, age 91, both hemispheres 37.4
2486 Female, age 94, both hemispheres 33.4

AMYGDALA - GTEx RNA-seqi
Average nTPM 48.0
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 48.0
Samples: 152

Max nTPM: 193.5
Min nTPM: 3.7
Std nTPM: 35.7
Median nTPM: 39.4
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 193.5
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 174.9
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 169.2
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 143.8
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 136.9
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 128.6
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 123.2
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 121.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 118.7
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 115.2
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 112.7
Show allShow less

AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 8.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 8.6
FF:10151-102I7 76 years, female 8.6

AMYGDALA - Pig RNA-seqi
Average nTPM 8.9
Pig sample Sample description nTPM
Amygdala
nTPM: 8.9
Samples: 4

Max nTPM: 13.1
Min nTPM: 4.8
Sample A Female 10.9
Sample B Female 4.8
Sample C Male 13.1
Sample D Male 6.7

AMYGDALA - Mouse RNA-seqi
Average nTPM 93.0
Mouse sample Sample description nTPM
Amygdala
nTPM: 93.1
Samples: 4

Max nTPM: 148.7
Min nTPM: 60.4
Sample A Male 60.4
Sample B Male 67.0
Sample C Female 148.7
Sample D Female 96.2

AMYGDALA - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 0.2
72103809 Antisense, RP_051017_03_D07, Mouse strain C57BL/6J (56 days, male) 0.2
69013627 Antisense, RP_050309_02_F10, Mouse strain C57BL/6J (56 days, male) 0.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.