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ALDH1A1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Mouse brain, Intensity
Hippocampal formationi 		152.019
RNA expressioni
Consensus:64.6 nTPM
HPA:64.6 nTPM
GTEx:74.4 nTPM
FANTOM5:40.6 Scaled Tags Per Million
Pig:45.7 nTPM
Mouse:121.1 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002123Antibody CAB020690
Glial cells Not detectedNot detected
Neuronal cells LowNot detected




HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA002123
Hippocampal formation mean intensity 152.019
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 93.233
Molecular layer of the dentate gyrus 139.380
Granular dentate gyrus 73.749
CA1 - oriens layer 122.443
CA1 - pyramidal layer 80.105
CA1 - radiatum layer 102.172
CA2 - oriens layer 117.526
CA2 - pyramidal layer 116.224
CA2 - radiatum layer 96.470
CA3 - oriens layer 120.269
CA3 - pyramidal layer 90.248
CA3 - radiatum layer 79.914
Stratum lucidum 106.476
Lacunosum moleculare 114.321
Subiculum 53.957

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 64.6
Sample id Sample description nTPM
Hippocampus
nTPM: 64.6
2148 Female, age 91, left hemisphere 87.8
1911 Female, age 85, right hemisphere 75.8
1855 Male, age 76, left hemisphere 59.9
1898 Male, age 80, left hemisphere 58.4
2621 Female, age 67, right hemisphere 53.9
2529 Female, age 94, left hemisphere 51.8
Dentate gyrus
nTPM: 57.0
1927 Female, age 91, both hemispheres 71.1
2528 Male, age 74, both hemispheres 67.5
2530 Female, age 94, left hemisphere 55.8
2246 Female, age 85, both hemispheres 50.2
2010 Male, age 76, both hemispheres 49.7
2531 Female, age 67, both hemispheres 48.0
Entorhinal gyrus
nTPM: 45.7
2117 Female, age 91, right hemisphere 71.5
1787 Male, age 76, left hemisphere 43.6
1938 Female, age 85, left hemisphere 42.0
2686 Male, age 75, right hemisphere 40.9
2764 Male, age 80, right hemisphere 38.3
2613 Female, age 94, left hemisphere 38.0
Hippocampus, CA1
nTPM: 52.9
1873 Female, age 85, both hemispheres 64.6
2527 Male, age 74, both hemispheres 58.9
2082 Female, age 91, right hemisphere 50.6
2045 Male, age 76, both hemispheres 49.9
2749 Male, age 80, left hemisphere 40.7
Hippocampus, CA2
nTPM: 54.9
2113 Female, age 91, right hemisphere 67.4
1963 Male, age 80, left hemisphere 58.6
2249 Male, age 74, both hemispheres 54.2
2437 Female, age 94, left hemisphere 51.4
1892 Male, age 76, both hemispheres 49.3
1940 Female, age 85, left hemisphere 48.4
Hippocampus, CA3
nTPM: 53.7
1891 Female, age 85, both hemispheres 68.0
2861 Female, age 67, both hemispheres 57.2
2620 Female, age 94, left hemisphere 54.6
1867 Male, age 76, both hemispheres 51.2
2436 Male, age 74, both hemispheres 48.4
2137 Male, age 80, left hemisphere 42.5
Parahippocampal cortex
nTPM: 46.5
2018 Male, age 76, both hemispheres 55.8
2692 Male, age 74, both hemispheres 53.2
2245 Female, age 91, both hemispheres 50.6
1990 Female, age 91, right hemisphere 49.6
2622 Female, age 67, right hemisphere 48.9
2532 Female, age 72, left hemisphere 44.9
1850 Male, age 80, both hemispheres 43.5
1933 Female, age 85, both hemispheres 40.1
2693 Female, age 94, both hemispheres 40.0
2250 Female, age 67, right hemisphere 38.3
Perirhinal gyrus
nTPM: 38.9
1841 Female, age 85, right hemisphere 43.3
1794 Male, age 80, right hemisphere 40.9
1847 Female, age 91, left hemisphere 38.4
2848 Male, age 76, right hemisphere 36.5
2521 Female, age 94, right hemisphere 35.6
Subiculum
nTPM: 57.5
2729 Female, age 91, right hemisphere 86.6
2438 Female, age 94, left hemisphere 55.3
2619 Male, age 74, both hemispheres 55.3
2042 Male, age 76, both hemispheres 53.3
1901 Male, age 80, both hemispheres 51.7
1977 Female, age 85, both hemispheres 43.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 74.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 74.4
Samples: 197

Max nTPM: 219.4
Min nTPM: 4.4
Std nTPM: 31.1
Median nTPM: 70.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 219.4
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 163.9
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 149.9
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 138.9
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 136.9
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 132.7
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 131.9
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 129.0
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 125.4
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 125.3
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 124.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.6
FF:10169-103B7 60 years, female 52.3
FF:10153-102I9 76 years, female 28.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 45.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 35.9
Samples: 4

Max nTPM: 44.6
Min nTPM: 26.3
Sample A Female 39.1
Sample B Female 26.3
Sample C Male 33.7
Sample D Male 44.6
Entorhinal cortex
nTPM: 45.7
Samples: 4

Max nTPM: 48.3
Min nTPM: 43.3
Sample A Female 48.3
Sample B Female 43.5
Sample C Male 43.3
Sample D Male 47.6
Subiculum
nTPM: 13.2
Samples: 4

Max nTPM: 28.8
Min nTPM: 2.1
Sample A Female 12.8
Sample B Female 9.1
Sample C Male 2.1
Sample D Male 28.8
Ventral hippocampus
nTPM: 16.3
Samples: 4

Max nTPM: 29.8
Min nTPM: 6.1
Sample A Female 13.3
Sample B Female 6.1
Sample C Male 15.8
Sample D Male 29.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 121.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 75.4
Samples: 4

Max nTPM: 97.8
Min nTPM: 48.2
Sample A Male 90.7
Sample B Male 64.8
Sample C Female 97.8
Sample D Female 48.2
Hippocampal formation
nTPM: 121.1
Samples: 4

Max nTPM: 136.4
Min nTPM: 109.6
Sample A Male 111.2
Sample B Male 109.6
Sample C Female 136.4
Sample D Female 127.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
69013627 Antisense, RP_050309_02_F10, Mouse strain C57BL/6J (56 days, male) 0.4
72103809 Antisense, RP_051017_03_D07, Mouse strain C57BL/6J (56 days, male) 0.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.