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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:34.8 nTPM
HPA:34.8 nTPM
GTEx:25.9 nTPM
FANTOM5:117.3 Scaled Tags Per Million
Pig:37.9 nTPM
Mouse:27.0 nTPM
Allen mouse:9.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043949Antibody CAB015942
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.8
Sample id Sample description nTPM
Hippocampus
nTPM: 33.3
1898 Male, age 80, left hemisphere 37.0
2529 Female, age 94, left hemisphere 34.6
1911 Female, age 85, right hemisphere 34.5
1855 Male, age 76, left hemisphere 32.3
2621 Female, age 67, right hemisphere 31.5
2148 Female, age 91, left hemisphere 30.1
Dentate gyrus
nTPM: 33.1
2010 Male, age 76, both hemispheres 36.0
1927 Female, age 91, both hemispheres 35.4
2246 Female, age 85, both hemispheres 33.6
2531 Female, age 67, both hemispheres 31.4
2530 Female, age 94, left hemisphere 31.1
2528 Male, age 74, both hemispheres 31.0
Entorhinal gyrus
nTPM: 30.7
1938 Female, age 85, left hemisphere 35.9
2117 Female, age 91, right hemisphere 31.5
1787 Male, age 76, left hemisphere 31.4
2764 Male, age 80, right hemisphere 30.6
2686 Male, age 75, right hemisphere 29.6
2613 Female, age 94, left hemisphere 25.2
Hippocampus, CA1
nTPM: 34.8
2045 Male, age 76, both hemispheres 37.4
1873 Female, age 85, both hemispheres 37.2
2749 Male, age 80, left hemisphere 37.0
2527 Male, age 74, both hemispheres 32.2
2082 Female, age 91, right hemisphere 30.2
Hippocampus, CA2
nTPM: 32.8
1892 Male, age 76, both hemispheres 37.3
1963 Male, age 80, left hemisphere 36.6
2249 Male, age 74, both hemispheres 32.2
2113 Female, age 91, right hemisphere 30.8
1940 Female, age 85, left hemisphere 30.3
2437 Female, age 94, left hemisphere 29.6
Hippocampus, CA3
nTPM: 32.2
1891 Female, age 85, both hemispheres 35.6
2137 Male, age 80, left hemisphere 35.2
1867 Male, age 76, both hemispheres 34.5
2436 Male, age 74, both hemispheres 29.4
2861 Female, age 67, both hemispheres 29.3
2620 Female, age 94, left hemisphere 29.1
Parahippocampal cortex
nTPM: 31.1
1933 Female, age 85, both hemispheres 34.1
2018 Male, age 76, both hemispheres 33.6
1850 Male, age 80, both hemispheres 33.3
2245 Female, age 91, both hemispheres 32.6
2532 Female, age 72, left hemisphere 30.7
2250 Female, age 67, right hemisphere 30.6
1990 Female, age 91, right hemisphere 30.4
2692 Male, age 74, both hemispheres 29.9
2693 Female, age 94, both hemispheres 28.6
2622 Female, age 67, right hemisphere 26.8
Perirhinal gyrus
nTPM: 33.0
1841 Female, age 85, right hemisphere 35.2
2848 Male, age 76, right hemisphere 33.7
1847 Female, age 91, left hemisphere 33.2
1794 Male, age 80, right hemisphere 32.9
2521 Female, age 94, right hemisphere 29.8
Subiculum
nTPM: 32.5
1901 Male, age 80, both hemispheres 35.4
1977 Female, age 85, both hemispheres 33.9
2438 Female, age 94, left hemisphere 33.6
2042 Male, age 76, both hemispheres 33.0
2619 Male, age 74, both hemispheres 29.6
2729 Female, age 91, right hemisphere 29.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 25.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.9
Samples: 197

Max nTPM: 95.8
Min nTPM: 14.6
Std nTPM: 8.4
Median nTPM: 24.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 95.8
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 61.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 56.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 49.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 48.8
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 48.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 44.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 43.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 39.3
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 39.1
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 38.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 117.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 117.3
FF:10153-102I9 76 years, female 118.5
FF:10169-103B7 60 years, female 116.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 37.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 37.9
Samples: 4

Max nTPM: 41.7
Min nTPM: 29.6
Sample A Female 40.5
Sample B Female 39.8
Sample C Male 41.7
Sample D Male 29.6
Entorhinal cortex
nTPM: 33.0
Samples: 4

Max nTPM: 35.5
Min nTPM: 30.6
Sample A Female 30.6
Sample B Female 35.5
Sample C Male 34.7
Sample D Male 31.0
Subiculum
nTPM: 34.3
Samples: 4

Max nTPM: 39.3
Min nTPM: 31.5
Sample A Female 39.3
Sample B Female 33.3
Sample C Male 33.0
Sample D Male 31.5
Ventral hippocampus
nTPM: 33.7
Samples: 4

Max nTPM: 37.4
Min nTPM: 30.8
Sample A Female 35.1
Sample B Female 31.5
Sample C Male 30.8
Sample D Male 37.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 27.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 26.8
Samples: 4

Max nTPM: 28.2
Min nTPM: 25.7
Sample A Male 26.3
Sample B Male 26.8
Sample C Female 25.7
Sample D Female 28.2
Hippocampal formation
nTPM: 27.0
Samples: 4

Max nTPM: 28.9
Min nTPM: 24.3
Sample A Male 28.3
Sample B Male 26.5
Sample C Female 28.9
Sample D Female 24.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.3
69080005 Antisense, RP_050324_01_C05, Mouse strain C57BL/6J (56 days, male) 9.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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