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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:55.5 nTPM
HPA:55.5 nTPM
GTEx:41.1 nTPM
FANTOM5:170.6 Scaled Tags Per Million
Pig:4.5 nTPM
Mouse:1.2 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037819Antibody CAB013687
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 55.5
Sample id Sample description nTPM
Hippocampus
nTPM: 53.6
1911 Female, age 85, right hemisphere 57.1
1898 Male, age 80, left hemisphere 54.7
2529 Female, age 94, left hemisphere 54.0
2148 Female, age 91, left hemisphere 53.1
2621 Female, age 67, right hemisphere 52.5
1855 Male, age 76, left hemisphere 50.3
Dentate gyrus
nTPM: 53.8
2531 Female, age 67, both hemispheres 59.6
2528 Male, age 74, both hemispheres 59.0
2530 Female, age 94, left hemisphere 53.7
2246 Female, age 85, both hemispheres 52.0
2010 Male, age 76, both hemispheres 50.0
1927 Female, age 91, both hemispheres 48.2
Entorhinal gyrus
nTPM: 49.2
2686 Male, age 75, right hemisphere 50.6
1787 Male, age 76, left hemisphere 50.1
2117 Female, age 91, right hemisphere 49.6
2613 Female, age 94, left hemisphere 48.9
2764 Male, age 80, right hemisphere 48.8
1938 Female, age 85, left hemisphere 47.3
Hippocampus, CA1
nTPM: 52.7
2082 Female, age 91, right hemisphere 59.6
1873 Female, age 85, both hemispheres 54.9
2527 Male, age 74, both hemispheres 54.6
2045 Male, age 76, both hemispheres 51.5
2749 Male, age 80, left hemisphere 42.9
Hippocampus, CA2
nTPM: 55.1
2113 Female, age 91, right hemisphere 61.6
2249 Male, age 74, both hemispheres 59.6
2437 Female, age 94, left hemisphere 59.1
1940 Female, age 85, left hemisphere 52.8
1892 Male, age 76, both hemispheres 49.1
1963 Male, age 80, left hemisphere 48.1
Hippocampus, CA3
nTPM: 55.5
1867 Male, age 76, both hemispheres 67.9
2861 Female, age 67, both hemispheres 56.3
1891 Female, age 85, both hemispheres 56.1
2620 Female, age 94, left hemisphere 53.1
2436 Male, age 74, both hemispheres 50.6
2137 Male, age 80, left hemisphere 48.9
Parahippocampal cortex
nTPM: 50.6
2692 Male, age 74, both hemispheres 58.8
2018 Male, age 76, both hemispheres 55.7
2622 Female, age 67, right hemisphere 50.5
1990 Female, age 91, right hemisphere 50.4
2532 Female, age 72, left hemisphere 50.1
2245 Female, age 91, both hemispheres 49.4
2693 Female, age 94, both hemispheres 49.0
2250 Female, age 67, right hemisphere 48.2
1850 Male, age 80, both hemispheres 47.3
1933 Female, age 85, both hemispheres 46.5
Perirhinal gyrus
nTPM: 47.0
1841 Female, age 85, right hemisphere 48.7
2521 Female, age 94, right hemisphere 48.2
1794 Male, age 80, right hemisphere 46.3
1847 Female, age 91, left hemisphere 46.1
2848 Male, age 76, right hemisphere 45.7
Subiculum
nTPM: 53.9
2619 Male, age 74, both hemispheres 59.7
2438 Female, age 94, left hemisphere 55.9
2729 Female, age 91, right hemisphere 54.2
1901 Male, age 80, both hemispheres 53.0
2042 Male, age 76, both hemispheres 53.0
1977 Female, age 85, both hemispheres 47.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 41.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 41.1
Samples: 197

Max nTPM: 338.4
Min nTPM: 2.9
Std nTPM: 51.6
Median nTPM: 21.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 338.4
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 307.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 295.8
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 232.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 203.1
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 202.0
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 178.0
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 138.6
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 136.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 132.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 129.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 170.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 170.6
FF:10169-103B7 60 years, female 196.7
FF:10153-102I9 76 years, female 144.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 4.5
Samples: 4

Max nTPM: 6.1
Min nTPM: 3.6
Sample A Female 4.4
Sample B Female 3.8
Sample C Male 6.1
Sample D Male 3.6
Entorhinal cortex
nTPM: 3.1
Samples: 4

Max nTPM: 4.4
Min nTPM: 2.5
Sample A Female 4.4
Sample B Female 2.9
Sample C Male 2.7
Sample D Male 2.5
Subiculum
nTPM: 4.0
Samples: 4

Max nTPM: 5.3
Min nTPM: 3.4
Sample A Female 3.4
Sample B Female 3.5
Sample C Male 3.6
Sample D Male 5.3
Ventral hippocampus
nTPM: 4.4
Samples: 4

Max nTPM: 5.2
Min nTPM: 3.1
Sample A Female 4.9
Sample B Female 3.1
Sample C Male 5.2
Sample D Male 4.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1.2
Samples: 4

Max nTPM: 1.6
Min nTPM: 0.7
Sample A Male 0.9
Sample B Male 1.6
Sample C Female 0.7
Sample D Female 1.4
Hippocampal formation
nTPM: 0.9
Samples: 4

Max nTPM: 1.4
Min nTPM: 0.0
Sample A Male 0.7
Sample B Male 1.4
Sample C Female 0.0
Sample D Female 1.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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