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AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:36.7 nTPM
HPA:36.7 nTPM
GTEx:31.2 nTPM
FANTOM5:100.4 Scaled Tags Per Million
Pig:27.0 nTPM
Mouse:11.9 nTPM
Allen mouse:11.3 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 36.7
Sample id Sample description nTPM
Amygdala
nTPM: 36.0
2514 Male, age 75, right hemisphere 43.2
2814 Male, age 76, right hemisphere 41.3
2695 Female, age 67, right hemisphere 36.4
2517 Female, age 94, left hemisphere 34.6
1987 Female, age 91, left hemisphere 24.3
Basal amygdala
nTPM: 30.2
2827 Female, age 67, right hemisphere 35.8
1955 Male, age 76, both hemispheres 31.7
2685 Female, age 94, left hemisphere 31.6
2609 Male, age 75, right hemisphere 31.2
2110 Male, age 80, left hemisphere 30.6
2243 Female, age 91, right hemisphere 20.2
Central amygdala
nTPM: 30.5
2701 Female, age 91, right hemisphere 34.7
1905 Male, age 76, both hemispheres 33.6
2239 Male, age 80, left hemisphere 29.4
2826 Female, age 94, left hemisphere 28.5
2515 Male, age 75, right hemisphere 26.1
Corticomedial amygdala
nTPM: 24.9
2429 Female, age 94, left hemisphere 32.0
2428 Male, age 75, right hemisphere 30.2
2240 Male, age 76, both hemispheres 28.0
2535 Female, age 67, right hemisphere 26.4
2829 Male, age 80, left hemisphere 19.4
2242 Female, age 91, right hemisphere 13.2
Lateral amygdala
nTPM: 36.7
2516 Male, age 75, right hemisphere 45.2
2830 Female, age 67, right hemisphere 41.6
1883 Male, age 76, both hemispheres 36.1
2534 Female, age 94, left hemisphere 33.3
2256 Male, age 80, left hemisphere 32.7
2255 Female, age 91, right hemisphere 31.2
Stria terminalis, bed nucleus
nTPM: 26.6
1974 Female, age 91, both hemispheres 30.2
2201 Male, age 74, unknown 26.3
2486 Female, age 94, both hemispheres 23.3

AMYGDALA - GTEx RNA-seqi
Average nTPM 31.2
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 31.2
Samples: 152

Max nTPM: 85.5
Min nTPM: 3.3
Std nTPM: 12.7
Median nTPM: 28.8
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 85.5
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 83.2
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 70.9
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 63.5
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 61.5
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 59.2
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 57.1
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 55.7
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 54.8
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 52.8
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 52.0
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 100.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 100.4
FF:10151-102I7 76 years, female 100.4

AMYGDALA - Pig RNA-seqi
Average nTPM 27.0
Pig sample Sample description nTPM
Amygdala
nTPM: 27.0
Samples: 4

Max nTPM: 28.9
Min nTPM: 24.1
Sample A Female 28.6
Sample B Female 26.3
Sample C Male 24.1
Sample D Male 28.9

AMYGDALA - Mouse RNA-seqi
Average nTPM 11.9
Mouse sample Sample description nTPM
Amygdala
nTPM: 12.0
Samples: 4

Max nTPM: 12.4
Min nTPM: 11.2
Sample A Male 12.0
Sample B Male 12.2
Sample C Female 11.2
Sample D Female 12.4

AMYGDALA - Allen Mouse ISHi
Max Expression energy 11.3
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 11.3
74821568 Antisense, RP_060321_02_A02, Mouse strain C57BL/6J (56 days, male) 11.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.