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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:41.2 nTPM
HPA:41.2 nTPM
GTEx:41.5 nTPM
FANTOM5:72.4 Scaled Tags Per Million
Pig:45.8 nTPM
Mouse:15.5 nTPM
Allen mouse:11.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039458
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 41.2
Sample id Sample description nTPM
Hippocampus
nTPM: 29.0
1911 Female, age 85, right hemisphere 38.7
2529 Female, age 94, left hemisphere 32.6
1855 Male, age 76, left hemisphere 28.5
2621 Female, age 67, right hemisphere 27.4
2148 Female, age 91, left hemisphere 24.9
1898 Male, age 80, left hemisphere 21.7
Dentate gyrus
nTPM: 29.4
2530 Female, age 94, left hemisphere 36.9
2528 Male, age 74, both hemispheres 34.3
2246 Female, age 85, both hemispheres 30.2
2010 Male, age 76, both hemispheres 28.2
2531 Female, age 67, both hemispheres 25.2
1927 Female, age 91, both hemispheres 21.8
Entorhinal gyrus
nTPM: 31.7
2117 Female, age 91, right hemisphere 49.2
2764 Male, age 80, right hemisphere 34.3
1938 Female, age 85, left hemisphere 30.4
2613 Female, age 94, left hemisphere 26.4
2686 Male, age 75, right hemisphere 25.7
1787 Male, age 76, left hemisphere 24.1
Hippocampus, CA1
nTPM: 25.4
2527 Male, age 74, both hemispheres 33.3
1873 Female, age 85, both hemispheres 29.2
2082 Female, age 91, right hemisphere 28.7
2045 Male, age 76, both hemispheres 18.9
2749 Male, age 80, left hemisphere 16.7
Hippocampus, CA2
nTPM: 29.0
2113 Female, age 91, right hemisphere 33.1
2249 Male, age 74, both hemispheres 33.1
1963 Male, age 80, left hemisphere 32.2
2437 Female, age 94, left hemisphere 28.5
1940 Female, age 85, left hemisphere 26.7
1892 Male, age 76, both hemispheres 20.4
Hippocampus, CA3
nTPM: 25.4
1891 Female, age 85, both hemispheres 51.6
2436 Male, age 74, both hemispheres 24.1
1867 Male, age 76, both hemispheres 23.7
2620 Female, age 94, left hemisphere 20.0
2861 Female, age 67, both hemispheres 17.3
2137 Male, age 80, left hemisphere 15.4
Parahippocampal cortex
nTPM: 28.9
2692 Male, age 74, both hemispheres 41.5
1990 Female, age 91, right hemisphere 38.0
2532 Female, age 72, left hemisphere 33.5
1933 Female, age 85, both hemispheres 30.4
2245 Female, age 91, both hemispheres 29.2
1850 Male, age 80, both hemispheres 26.7
2018 Male, age 76, both hemispheres 26.4
2693 Female, age 94, both hemispheres 25.3
2250 Female, age 67, right hemisphere 22.3
2622 Female, age 67, right hemisphere 15.6
Perirhinal gyrus
nTPM: 22.3
2848 Male, age 76, right hemisphere 26.8
2521 Female, age 94, right hemisphere 23.9
1841 Female, age 85, right hemisphere 22.5
1847 Female, age 91, left hemisphere 20.1
1794 Male, age 80, right hemisphere 18.2
Subiculum
nTPM: 41.2
2042 Male, age 76, both hemispheres 52.4
1901 Male, age 80, both hemispheres 47.8
1977 Female, age 85, both hemispheres 43.6
2438 Female, age 94, left hemisphere 38.6
2619 Male, age 74, both hemispheres 35.2
2729 Female, age 91, right hemisphere 29.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 41.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 41.5
Samples: 197

Max nTPM: 186.3
Min nTPM: 10.9
Std nTPM: 24.3
Median nTPM: 34.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 186.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 130.7
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 118.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 113.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 109.0
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 92.3
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 92.2
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 92.2
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 87.1
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 85.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 83.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 72.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 72.4
FF:10153-102I9 76 years, female 121.9
FF:10169-103B7 60 years, female 23.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 45.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 45.8
Samples: 4

Max nTPM: 65.9
Min nTPM: 32.4
Sample A Female 65.9
Sample B Female 35.3
Sample C Male 49.5
Sample D Male 32.4
Entorhinal cortex
nTPM: 26.2
Samples: 4

Max nTPM: 28.5
Min nTPM: 24.3
Sample A Female 28.5
Sample B Female 24.7
Sample C Male 27.3
Sample D Male 24.3
Subiculum
nTPM: 26.4
Samples: 4

Max nTPM: 35.1
Min nTPM: 22.5
Sample A Female 35.1
Sample B Female 24.2
Sample C Male 22.5
Sample D Male 23.7
Ventral hippocampus
nTPM: 37.5
Samples: 4

Max nTPM: 50.5
Min nTPM: 22.2
Sample A Female 38.9
Sample B Female 22.2
Sample C Male 38.5
Sample D Male 50.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.4
Samples: 4

Max nTPM: 15.9
Min nTPM: 12.9
Sample A Male 15.9
Sample B Male 13.7
Sample C Female 12.9
Sample D Female 15.2
Hippocampal formation
nTPM: 15.6
Samples: 4

Max nTPM: 18.1
Min nTPM: 13.4
Sample A Male 13.4
Sample B Male 16.7
Sample C Female 18.1
Sample D Female 14.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.9
74821568 Antisense, RP_060321_02_A02, Mouse strain C57BL/6J (56 days, male) 11.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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