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PRDX3
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:95.2 nTPM
HPA:95.2 nTPM
GTEx:91.9 nTPM
FANTOM5:145.3 Scaled Tags Per Million
Pig:99.6 nTPM
Mouse:112.1 nTPM
Allen mouse:5.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041488Antibody CAB008656
Glial cells Not detectedLow
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 95.2
Sample id Sample description nTPM
Hippocampus
nTPM: 91.8
1898 Male, age 80, left hemisphere 102.5
1855 Male, age 76, left hemisphere 93.4
1911 Female, age 85, right hemisphere 90.4
2148 Female, age 91, left hemisphere 88.3
2529 Female, age 94, left hemisphere 88.3
2621 Female, age 67, right hemisphere 87.8
Dentate gyrus
nTPM: 90.8
1927 Female, age 91, both hemispheres 96.8
2010 Male, age 76, both hemispheres 96.7
2528 Male, age 74, both hemispheres 92.7
2530 Female, age 94, left hemisphere 88.5
2246 Female, age 85, both hemispheres 88.3
2531 Female, age 67, both hemispheres 81.5
Entorhinal gyrus
nTPM: 88.7
2117 Female, age 91, right hemisphere 94.1
1938 Female, age 85, left hemisphere 93.7
1787 Male, age 76, left hemisphere 88.6
2764 Male, age 80, right hemisphere 88.6
2613 Female, age 94, left hemisphere 84.5
2686 Male, age 75, right hemisphere 82.6
Hippocampus, CA1
nTPM: 95.2
2749 Male, age 80, left hemisphere 109.2
1873 Female, age 85, both hemispheres 97.0
2527 Male, age 74, both hemispheres 93.6
2045 Male, age 76, both hemispheres 88.4
2082 Female, age 91, right hemisphere 88.1
Hippocampus, CA2
nTPM: 94.7
1892 Male, age 76, both hemispheres 102.7
1963 Male, age 80, left hemisphere 101.7
2249 Male, age 74, both hemispheres 100.8
1940 Female, age 85, left hemisphere 89.6
2113 Female, age 91, right hemisphere 87.4
2437 Female, age 94, left hemisphere 86.1
Hippocampus, CA3
nTPM: 92.9
2436 Male, age 74, both hemispheres 105.2
2137 Male, age 80, left hemisphere 97.9
1867 Male, age 76, both hemispheres 96.0
1891 Female, age 85, both hemispheres 92.3
2620 Female, age 94, left hemisphere 85.5
2861 Female, age 67, both hemispheres 80.6
Parahippocampal cortex
nTPM: 89.0
1850 Male, age 80, both hemispheres 94.2
2250 Female, age 67, right hemisphere 92.9
1933 Female, age 85, both hemispheres 91.6
1990 Female, age 91, right hemisphere 91.0
2018 Male, age 76, both hemispheres 88.8
2693 Female, age 94, both hemispheres 88.8
2692 Male, age 74, both hemispheres 87.9
2245 Female, age 91, both hemispheres 87.0
2532 Female, age 72, left hemisphere 84.2
2622 Female, age 67, right hemisphere 83.3
Perirhinal gyrus
nTPM: 92.6
1847 Female, age 91, left hemisphere 96.5
1841 Female, age 85, right hemisphere 95.1
1794 Male, age 80, right hemisphere 93.6
2521 Female, age 94, right hemisphere 90.4
2848 Male, age 76, right hemisphere 87.6
Subiculum
nTPM: 89.1
1901 Male, age 80, both hemispheres 92.9
2729 Female, age 91, right hemisphere 91.8
1977 Female, age 85, both hemispheres 91.1
2042 Male, age 76, both hemispheres 89.8
2619 Male, age 74, both hemispheres 86.3
2438 Female, age 94, left hemisphere 82.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 91.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 91.9
Samples: 197

Max nTPM: 212.3
Min nTPM: 51.2
Std nTPM: 21.2
Median nTPM: 90.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 212.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 157.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 143.5
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 133.3
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 131.1
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 130.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 128.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 127.2
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 127.1
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 125.8
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 123.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 145.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 145.3
FF:10169-103B7 60 years, female 160.0
FF:10153-102I9 76 years, female 130.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 99.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 99.6
Samples: 4

Max nTPM: 139.9
Min nTPM: 62.1
Sample A Female 139.9
Sample B Female 99.2
Sample C Male 97.1
Sample D Male 62.1
Entorhinal cortex
nTPM: 86.8
Samples: 4

Max nTPM: 106.2
Min nTPM: 63.0
Sample A Female 98.3
Sample B Female 106.2
Sample C Male 79.7
Sample D Male 63.0
Subiculum
nTPM: 96.5
Samples: 4

Max nTPM: 131.0
Min nTPM: 77.3
Sample A Female 131.0
Sample B Female 98.4
Sample C Male 77.3
Sample D Male 79.4
Ventral hippocampus
nTPM: 93.0
Samples: 4

Max nTPM: 113.6
Min nTPM: 82.3
Sample A Female 113.6
Sample B Female 82.3
Sample C Male 92.4
Sample D Male 83.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 112.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 112.1
Samples: 4

Max nTPM: 118.6
Min nTPM: 108.2
Sample A Male 111.1
Sample B Male 108.2
Sample C Female 118.6
Sample D Female 110.3
Hippocampal formation
nTPM: 110.1
Samples: 4

Max nTPM: 127.5
Min nTPM: 97.3
Sample A Male 127.5
Sample B Male 97.3
Sample C Female 104.3
Sample D Female 111.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.1
70743842 Antisense, RP_050725_01_G04, Mouse strain C57BL/6J (56 days, male) 8.2
633302 Antisense, RP_040907_02_F10, Mouse strain C57BL/6J (56 days, male) 2.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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