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AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		111.567
RNA expressioni
Consensus:19.6 nTPM
HPA:19.6 nTPM
GTEx:20.7 nTPM
FANTOM5:8.2 Scaled Tags Per Million
Pig:8.2 nTPM
Mouse:36.1 nTPM
Allen mouse:0.2 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA039480
Amygdala mean intensity 111.567
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract -
Basal medial amygdaloid nucleus 89.743
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 67.179
Cortical amygdala 65.407
Central amygdala 111.567
Medial amygdaloid nucleus 91.055

AMYGDALA - HPA Brain RNA-seq
Max nTPM 19.6
Sample id Sample description nTPM
Amygdala
nTPM: 18.4
2695 Female, age 67, right hemisphere 21.0
2514 Male, age 75, right hemisphere 18.6
2814 Male, age 76, right hemisphere 18.0
1987 Female, age 91, left hemisphere 17.2
2517 Female, age 94, left hemisphere 17.1
Basal amygdala
nTPM: 17.4
2609 Male, age 75, right hemisphere 20.5
2827 Female, age 67, right hemisphere 18.2
2243 Female, age 91, right hemisphere 17.1
2685 Female, age 94, left hemisphere 16.6
2110 Male, age 80, left hemisphere 16.5
1955 Male, age 76, both hemispheres 15.6
Central amygdala
nTPM: 18.3
2826 Female, age 94, left hemisphere 20.6
2515 Male, age 75, right hemisphere 18.9
1905 Male, age 76, both hemispheres 18.3
2239 Male, age 80, left hemisphere 17.0
2701 Female, age 91, right hemisphere 16.9
Corticomedial amygdala
nTPM: 15.1
2428 Male, age 75, right hemisphere 17.5
2829 Male, age 80, left hemisphere 15.8
2535 Female, age 67, right hemisphere 14.8
2429 Female, age 94, left hemisphere 14.6
2240 Male, age 76, both hemispheres 14.0
2242 Female, age 91, right hemisphere 13.8
Lateral amygdala
nTPM: 19.6
2516 Male, age 75, right hemisphere 21.4
2256 Male, age 80, left hemisphere 20.6
2255 Female, age 91, right hemisphere 19.7
2830 Female, age 67, right hemisphere 19.5
2534 Female, age 94, left hemisphere 18.3
1883 Male, age 76, both hemispheres 18.2
Stria terminalis, bed nucleus
nTPM: 13.9
2201 Male, age 74, unknown 15.2
1974 Female, age 91, both hemispheres 13.5
2486 Female, age 94, both hemispheres 12.8

AMYGDALA - GTEx RNA-seqi
Average nTPM 20.7
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 20.7
Samples: 152

Max nTPM: 43.4
Min nTPM: 5.2
Std nTPM: 6.6
Median nTPM: 20.3
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 43.4
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 39.0
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 36.2
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 32.3
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 32.2
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 31.5
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 31.3
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 31.1
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 30.3
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 30.3
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 30.1
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 8.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 8.2
FF:10151-102I7 76 years, female 8.2

AMYGDALA - Pig RNA-seqi
Average nTPM 8.2
Pig sample Sample description nTPM
Amygdala
nTPM: 8.2
Samples: 4

Max nTPM: 9.6
Min nTPM: 6.4
Sample A Female 9.6
Sample B Female 8.1
Sample C Male 8.7
Sample D Male 6.4

AMYGDALA - Mouse RNA-seqi
Average nTPM 36.1
Mouse sample Sample description nTPM
Amygdala
nTPM: 36.2
Samples: 4

Max nTPM: 40.4
Min nTPM: 33.5
Sample A Male 33.5
Sample B Male 35.9
Sample C Female 40.4
Sample D Female 34.8

AMYGDALA - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 0.2
513493 Antisense, RP_040810_02_A03, Mouse strain C57BL/6J (56 days, male) 0.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.