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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:428.7 nTPM
HPA:428.7 nTPM
GTEx:480.5 nTPM
FANTOM5:3111.5 Scaled Tags Per Million
Pig:433.5 nTPM
Mouse:911.1 nTPM
Allen mouse:20.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001254Antibody CAB047313
Glial cells LowMedium
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 428.7
Sample id Sample description nTPM
Hippocampus
nTPM: 403.9
2529 Female, age 94, left hemisphere 480.6
1898 Male, age 80, left hemisphere 475.0
2148 Female, age 91, left hemisphere 407.2
1911 Female, age 85, right hemisphere 386.0
2621 Female, age 67, right hemisphere 379.4
1855 Male, age 76, left hemisphere 295.3
Dentate gyrus
nTPM: 352.6
2530 Female, age 94, left hemisphere 436.1
2528 Male, age 74, both hemispheres 435.2
2246 Female, age 85, both hemispheres 371.7
1927 Female, age 91, both hemispheres 318.6
2010 Male, age 76, both hemispheres 294.1
2531 Female, age 67, both hemispheres 259.8
Entorhinal gyrus
nTPM: 402.0
2764 Male, age 80, right hemisphere 494.9
1938 Female, age 85, left hemisphere 455.3
2117 Female, age 91, right hemisphere 453.2
2613 Female, age 94, left hemisphere 361.2
1787 Male, age 76, left hemisphere 355.5
2686 Male, age 75, right hemisphere 291.6
Hippocampus, CA1
nTPM: 428.7
2749 Male, age 80, left hemisphere 664.1
2527 Male, age 74, both hemispheres 572.4
2082 Female, age 91, right hemisphere 387.0
1873 Female, age 85, both hemispheres 311.9
2045 Male, age 76, both hemispheres 208.1
Hippocampus, CA2
nTPM: 405.8
2249 Male, age 74, both hemispheres 479.7
2437 Female, age 94, left hemisphere 442.2
1940 Female, age 85, left hemisphere 409.9
1963 Male, age 80, left hemisphere 405.1
2113 Female, age 91, right hemisphere 360.6
1892 Male, age 76, both hemispheres 337.0
Hippocampus, CA3
nTPM: 389.3
2137 Male, age 80, left hemisphere 581.8
2436 Male, age 74, both hemispheres 446.4
2861 Female, age 67, both hemispheres 368.9
1891 Female, age 85, both hemispheres 321.8
1867 Male, age 76, both hemispheres 315.6
2620 Female, age 94, left hemisphere 301.1
Parahippocampal cortex
nTPM: 403.3
2245 Female, age 91, both hemispheres 520.8
2250 Female, age 67, right hemisphere 457.5
2622 Female, age 67, right hemisphere 431.3
1933 Female, age 85, both hemispheres 431.1
2692 Male, age 74, both hemispheres 405.8
1850 Male, age 80, both hemispheres 392.1
1990 Female, age 91, right hemisphere 388.5
2532 Female, age 72, left hemisphere 362.1
2693 Female, age 94, both hemispheres 328.9
2018 Male, age 76, both hemispheres 314.4
Perirhinal gyrus
nTPM: 413.5
1794 Male, age 80, right hemisphere 559.5
1847 Female, age 91, left hemisphere 443.1
1841 Female, age 85, right hemisphere 390.7
2521 Female, age 94, right hemisphere 370.4
2848 Male, age 76, right hemisphere 303.9
Subiculum
nTPM: 393.4
2619 Male, age 74, both hemispheres 477.4
1901 Male, age 80, both hemispheres 455.0
1977 Female, age 85, both hemispheres 425.5
2438 Female, age 94, left hemisphere 375.3
2729 Female, age 91, right hemisphere 344.0
2042 Male, age 76, both hemispheres 283.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 480.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 480.5
Samples: 197

Max nTPM: 1021.3
Min nTPM: 89.0
Std nTPM: 179.4
Median nTPM: 476.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 1021.3
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 1000.7
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 926.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 915.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 903.5
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 843.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 826.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 800.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 793.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 789.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 778.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 3111.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 3111.5
FF:10169-103B7 60 years, female 3116.0
FF:10153-102I9 76 years, female 3106.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 433.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 422.3
Samples: 4

Max nTPM: 563.4
Min nTPM: 316.9
Sample A Female 563.4
Sample B Female 349.9
Sample C Male 458.8
Sample D Male 316.9
Entorhinal cortex
nTPM: 431.9
Samples: 4

Max nTPM: 519.5
Min nTPM: 355.7
Sample A Female 434.1
Sample B Female 519.5
Sample C Male 418.3
Sample D Male 355.7
Subiculum
nTPM: 337.0
Samples: 4

Max nTPM: 450.9
Min nTPM: 273.0
Sample A Female 450.9
Sample B Female 304.1
Sample C Male 320.0
Sample D Male 273.0
Ventral hippocampus
nTPM: 433.5
Samples: 4

Max nTPM: 577.9
Min nTPM: 283.3
Sample A Female 446.0
Sample B Female 283.3
Sample C Male 577.9
Sample D Male 426.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 911.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 911.1
Samples: 4

Max nTPM: 1046.9
Min nTPM: 803.8
Sample A Male 980.8
Sample B Male 1046.9
Sample C Female 812.9
Sample D Female 803.8
Hippocampal formation
nTPM: 829.5
Samples: 4

Max nTPM: 972.6
Min nTPM: 755.5
Sample A Male 755.5
Sample B Male 804.5
Sample C Female 785.2
Sample D Female 972.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 20.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 20.7
70927826 Antisense, RP_050725_01_B02, Mouse strain C57BL/6J (56 days, male) 20.8
393211 Antisense, RP_040804_02_D11, Mouse strain C57BL/6J (56 days, male) 20.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.