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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:146.2 nTPM
HPA:146.2 nTPM
GTEx:145.9 nTPM
FANTOM5:253.4 Scaled Tags Per Million
Pig:48.3 nTPM
Mouse:28.8 nTPM
Allen mouse:3.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006719Antibody CAB018660Antibody CAB018749
Glial cells LowLowLow
Neuronal cells HighHighHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 146.2
Sample id Sample description nTPM
Hippocampus
nTPM: 128.2
1898 Male, age 80, left hemisphere 139.5
2529 Female, age 94, left hemisphere 130.8
1855 Male, age 76, left hemisphere 127.7
2621 Female, age 67, right hemisphere 125.0
2148 Female, age 91, left hemisphere 124.7
1911 Female, age 85, right hemisphere 121.5
Dentate gyrus
nTPM: 130.5
1927 Female, age 91, both hemispheres 139.0
2530 Female, age 94, left hemisphere 131.2
2010 Male, age 76, both hemispheres 130.7
2246 Female, age 85, both hemispheres 130.3
2528 Male, age 74, both hemispheres 128.1
2531 Female, age 67, both hemispheres 123.6
Entorhinal gyrus
nTPM: 133.4
2764 Male, age 80, right hemisphere 148.4
1938 Female, age 85, left hemisphere 143.8
1787 Male, age 76, left hemisphere 133.5
2117 Female, age 91, right hemisphere 130.8
2613 Female, age 94, left hemisphere 127.1
2686 Male, age 75, right hemisphere 116.9
Hippocampus, CA1
nTPM: 135.9
2749 Male, age 80, left hemisphere 159.8
2527 Male, age 74, both hemispheres 133.6
1873 Female, age 85, both hemispheres 132.5
2045 Male, age 76, both hemispheres 132.3
2082 Female, age 91, right hemisphere 121.0
Hippocampus, CA2
nTPM: 129.6
1963 Male, age 80, left hemisphere 141.9
1892 Male, age 76, both hemispheres 137.0
2249 Male, age 74, both hemispheres 130.7
2113 Female, age 91, right hemisphere 124.0
1940 Female, age 85, left hemisphere 123.4
2437 Female, age 94, left hemisphere 120.4
Hippocampus, CA3
nTPM: 127.3
2137 Male, age 80, left hemisphere 141.6
2620 Female, age 94, left hemisphere 131.4
1867 Male, age 76, both hemispheres 129.8
2436 Male, age 74, both hemispheres 126.3
1891 Female, age 85, both hemispheres 122.7
2861 Female, age 67, both hemispheres 111.8
Parahippocampal cortex
nTPM: 132.5
1850 Male, age 80, both hemispheres 145.6
1990 Female, age 91, right hemisphere 138.8
1933 Female, age 85, both hemispheres 138.4
2250 Female, age 67, right hemisphere 138.3
2245 Female, age 91, both hemispheres 137.1
2532 Female, age 72, left hemisphere 136.4
2018 Male, age 76, both hemispheres 127.7
2692 Male, age 74, both hemispheres 122.9
2693 Female, age 94, both hemispheres 122.9
2622 Female, age 67, right hemisphere 116.8
Perirhinal gyrus
nTPM: 146.2
1794 Male, age 80, right hemisphere 155.9
1847 Female, age 91, left hemisphere 151.4
1841 Female, age 85, right hemisphere 146.4
2521 Female, age 94, right hemisphere 142.2
2848 Male, age 76, right hemisphere 135.1
Subiculum
nTPM: 125.6
1977 Female, age 85, both hemispheres 145.1
1901 Male, age 80, both hemispheres 128.2
2619 Male, age 74, both hemispheres 126.5
2438 Female, age 94, left hemisphere 119.9
2042 Male, age 76, both hemispheres 117.5
2729 Female, age 91, right hemisphere 116.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 145.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 145.9
Samples: 197

Max nTPM: 273.0
Min nTPM: 66.9
Std nTPM: 36.2
Median nTPM: 139.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 273.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 240.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 224.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 222.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 222.3
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 221.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 218.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 217.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 216.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 213.4
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 213.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 253.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 253.4
FF:10169-103B7 60 years, female 297.1
FF:10153-102I9 76 years, female 209.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 48.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 48.4
Samples: 4

Max nTPM: 59.9
Min nTPM: 41.2
Sample A Female 59.9
Sample B Female 45.8
Sample C Male 46.5
Sample D Male 41.2
Entorhinal cortex
nTPM: 40.8
Samples: 4

Max nTPM: 44.8
Min nTPM: 32.5
Sample A Female 44.8
Sample B Female 42.3
Sample C Male 43.4
Sample D Male 32.5
Subiculum
nTPM: 44.7
Samples: 4

Max nTPM: 60.3
Min nTPM: 38.8
Sample A Female 60.3
Sample B Female 40.7
Sample C Male 38.9
Sample D Male 38.8
Ventral hippocampus
nTPM: 44.7
Samples: 4

Max nTPM: 50.2
Min nTPM: 34.8
Sample A Female 48.3
Sample B Female 34.8
Sample C Male 50.2
Sample D Male 45.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 28.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.3
Samples: 4

Max nTPM: 29.7
Min nTPM: 27.4
Sample A Male 27.9
Sample B Male 27.4
Sample C Female 28.1
Sample D Female 29.7
Hippocampal formation
nTPM: 28.9
Samples: 4

Max nTPM: 29.5
Min nTPM: 27.5
Sample A Male 29.3
Sample B Male 29.5
Sample C Female 29.2
Sample D Female 27.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.4
112196711 Antisense, RP_110421_01_D11, Mouse strain C57BL/6J (56 days, male) 3.4
100144105 Antisense, RP_110421_01_D11, Mouse strain C57BL/6J (56 days, male) 3.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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