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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:40.6 nTPM
HPA:40.6 nTPM
GTEx:66.9 nTPM
FANTOM5:13.5 Scaled Tags Per Million
Pig:59.1 nTPM
Mouse:142.3 nTPM
Allen mouse:3.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003280
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 40.6
Sample id Sample description nTPM
Hippocampus
nTPM: 40.6
1855 Male, age 76, left hemisphere 42.6
1911 Female, age 85, right hemisphere 41.5
2529 Female, age 94, left hemisphere 40.7
1898 Male, age 80, left hemisphere 40.0
2621 Female, age 67, right hemisphere 39.5
2148 Female, age 91, left hemisphere 39.4
Dentate gyrus
nTPM: 39.4
2246 Female, age 85, both hemispheres 41.9
2010 Male, age 76, both hemispheres 40.1
2531 Female, age 67, both hemispheres 39.2
1927 Female, age 91, both hemispheres 38.7
2530 Female, age 94, left hemisphere 38.2
2528 Male, age 74, both hemispheres 37.9
Entorhinal gyrus
nTPM: 38.3
2117 Female, age 91, right hemisphere 41.4
1938 Female, age 85, left hemisphere 39.7
2686 Male, age 75, right hemisphere 37.9
1787 Male, age 76, left hemisphere 37.7
2764 Male, age 80, right hemisphere 37.3
2613 Female, age 94, left hemisphere 35.7
Hippocampus, CA1
nTPM: 40.3
2749 Male, age 80, left hemisphere 43.1
2527 Male, age 74, both hemispheres 40.7
2045 Male, age 76, both hemispheres 39.8
2082 Female, age 91, right hemisphere 39.0
1873 Female, age 85, both hemispheres 38.9
Hippocampus, CA2
nTPM: 38.8
2249 Male, age 74, both hemispheres 41.8
1892 Male, age 76, both hemispheres 39.4
1940 Female, age 85, left hemisphere 38.5
2113 Female, age 91, right hemisphere 38.4
1963 Male, age 80, left hemisphere 38.0
2437 Female, age 94, left hemisphere 37.0
Hippocampus, CA3
nTPM: 39.4
2436 Male, age 74, both hemispheres 40.7
1867 Male, age 76, both hemispheres 40.0
2137 Male, age 80, left hemisphere 39.8
1891 Female, age 85, both hemispheres 39.5
2861 Female, age 67, both hemispheres 39.4
2620 Female, age 94, left hemisphere 36.8
Parahippocampal cortex
nTPM: 37.6
2250 Female, age 67, right hemisphere 39.2
2692 Male, age 74, both hemispheres 39.2
1850 Male, age 80, both hemispheres 37.7
2532 Female, age 72, left hemisphere 37.5
2245 Female, age 91, both hemispheres 37.4
1933 Female, age 85, both hemispheres 37.3
2622 Female, age 67, right hemisphere 37.2
1990 Female, age 91, right hemisphere 37.0
2693 Female, age 94, both hemispheres 36.8
2018 Male, age 76, both hemispheres 36.5
Perirhinal gyrus
nTPM: 38.2
1794 Male, age 80, right hemisphere 39.6
1841 Female, age 85, right hemisphere 39.1
2521 Female, age 94, right hemisphere 37.8
2848 Male, age 76, right hemisphere 37.5
1847 Female, age 91, left hemisphere 37.0
Subiculum
nTPM: 38.1
1901 Male, age 80, both hemispheres 41.2
1977 Female, age 85, both hemispheres 40.7
2042 Male, age 76, both hemispheres 40.5
2729 Female, age 91, right hemisphere 37.3
2619 Male, age 74, both hemispheres 36.6
2438 Female, age 94, left hemisphere 32.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 66.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 66.9
Samples: 197

Max nTPM: 136.9
Min nTPM: 40.4
Std nTPM: 14.0
Median nTPM: 65.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 136.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 124.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 118.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 112.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 99.4
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 97.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 94.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 90.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 89.8
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 88.3
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 88.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 13.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 13.5
FF:10153-102I9 76 years, female 17.6
FF:10169-103B7 60 years, female 9.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 59.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 59.1
Samples: 4

Max nTPM: 81.0
Min nTPM: 41.5
Sample A Female 81.0
Sample B Female 57.8
Sample C Male 55.9
Sample D Male 41.5
Entorhinal cortex
nTPM: 46.8
Samples: 4

Max nTPM: 51.3
Min nTPM: 38.0
Sample A Female 47.6
Sample B Female 51.3
Sample C Male 50.3
Sample D Male 38.0
Subiculum
nTPM: 48.2
Samples: 4

Max nTPM: 62.9
Min nTPM: 40.2
Sample A Female 62.9
Sample B Female 46.5
Sample C Male 43.0
Sample D Male 40.2
Ventral hippocampus
nTPM: 54.0
Samples: 4

Max nTPM: 61.7
Min nTPM: 41.1
Sample A Female 54.0
Sample B Female 41.1
Sample C Male 61.7
Sample D Male 59.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 142.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 119.8
Samples: 4

Max nTPM: 136.9
Min nTPM: 110.6
Sample A Male 114.7
Sample B Male 110.6
Sample C Female 136.9
Sample D Female 117.0
Hippocampal formation
nTPM: 142.3
Samples: 4

Max nTPM: 151.8
Min nTPM: 125.7
Sample A Male 151.8
Sample B Male 125.7
Sample C Female 145.8
Sample D Female 145.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.8
69783071 Antisense, RP_050505_04_C10, Mouse strain C57BL/6J (56 days, male) 3.8

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The Human Protein Atlas

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