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FAM102A
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:86.8 nTPM
HPA:86.8 nTPM
GTEx:76.7 nTPM
FANTOM5:263.6 Scaled Tags Per Million
Pig:37.0 nTPM
Mouse:54.2 nTPM
Allen mouse:1.9 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 86.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 76.5
2290 Female, age 72, unknown 93.3
2846 Female, age 79, unknown 85.1
1857 Female, age 85, left hemisphere 81.6
2288 Male, age 75, left hemisphere 79.7
2289 Male, age 61, right hemisphere 70.5
1781 Male, age 74, unknown 69.0
1854 Male, age 80, left hemisphere 68.3
2481 Female, age 94, left hemisphere 64.1
Claustrum
nTPM: 64.5
2292 Female, age 85, both hemispheres 91.7
1956 Male, age 74, unknown 67.5
2196 Female, age 79, unknown 66.4
2568 Male, age 61, both hemispheres 61.8
2645 Female, age 72, unknown 61.8
2198 Male, age 80, both hemispheres 61.6
2284 Female, age 91, both hemispheres 58.4
2491 Male, age 75, both hemispheres 57.1
2392 Female, age 94, both hemispheres 54.6
Globus pallidus, externus
nTPM: 86.8
2646 Male, age 61, right hemisphere 106.7
2567 Female, age 72, unknown 100.8
1996 Male, age 80, right hemisphere 82.5
2395 Male, age 75, both hemispheres 76.6
2772 Female, age 79, unknown 67.3
Globus pallidus, internus
nTPM: 84.3
2111 Female, age 85, right hemisphere 102.1
2566 Female, age 72, unknown 95.6
2287 Male, age 75, right hemisphere 89.3
2778 Female, age 91, both hemispheres 89.3
2037 Male, age 80, right hemisphere 77.9
1818 Male, age 74, unknown 71.3
2483 Female, age 94, right hemisphere 64.6
Nucleus accumbens
nTPM: 73.9
1783 Male, age 74, unknown 85.4
1806 Female, age 85, left hemisphere 84.7
2698 Female, age 72, unknown 80.2
2391 Female, age 94, left hemisphere 79.1
2286 Male, age 75, left hemisphere 70.0
2732 Male, age 80, right hemisphere 69.7
2824 Male, age 61, right hemisphere 64.7
1856 Female, age 91, right hemisphere 57.7
Nucleus basalis of Meynert
nTPM: 72.9
2569 Male, age 61, both hemispheres 106.5
2484 Female, age 94, left hemisphere 64.0
2393 Male, age 80, right hemisphere 63.3
2821 Male, age 75, both hemispheres 57.7
Nucleus of the diagonal band
nTPM: 43.4
2195 Female, age 85, both hemispheres 48.8
1979 Male, age 74, unknown 46.9
1812 Female, age 91, both hemispheres 44.2
2775 Male, age 80, right hemisphere 40.5
2029 Male, age 61, right hemisphere 36.6
Olfactory tubercle
nTPM: 40.7
2487 Female, age 94, left hemisphere 42.7
1846 Male, age 80, right hemisphere 42.4
2856 Male, age 75, right hemisphere 40.8
1998 Female, age 91, both hemispheres 37.0
Putamen
nTPM: 80.8
2489 Female, age 72, unknown 95.2
1829 Male, age 74, unknown 93.9
2647 Male, age 75, left hemisphere 90.6
2466 Female, age 79, unknown 81.2
1838 Male, age 80, right hemisphere 73.0
1937 Female, age 91, right hemisphere 66.7
2482 Female, age 94, left hemisphere 64.9
Septal nuclei
nTPM: 49.9
2394 Male, age 61, left hemisphere 61.4
2059 Female, age 85, both hemispheres 59.3
1960 Male, age 74, unknown 49.0
2199 Male, age 80, right hemisphere 47.9
2031 Female, age 72, unknown 47.1
2629 Female, age 94, right hemisphere 45.2
2009 Female, age 91, both hemispheres 39.2

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 76.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 76.7
Samples: 246

Max nTPM: 125.3
Min nTPM: 29.5
Std nTPM: 19.7
Median nTPM: 74.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 125.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 125.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 121.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 118.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 115.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 115.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 113.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 113.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 112.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 112.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 110.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 74.3
Samples: 246

Max nTPM: 135.7
Min nTPM: 24.9
Std nTPM: 22.8
Median nTPM: 76.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 135.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 122.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 117.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 117.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 117.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 114.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 113.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 112.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 112.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 112.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 112.1
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Brain - Putamen (basal ganglia)
Average nTPM: 76.7
Samples: 205

Max nTPM: 137.4
Min nTPM: 33.8
Std nTPM: 21.7
Median nTPM: 76.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 137.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 129.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 123.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 121.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 120.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 120.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 120.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 119.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 119.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 114.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 114.1
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 263.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 134.6
FF:10164-103B2 76 years, female 134.6
Globus pallidus
Scaled Tags Per Million: 263.6
FF:10175-103C4 60 years, female 284.1
FF:10161-103A8 76 years, female 243.1
Nucleus accumbens
Scaled Tags Per Million: 175.3
FF:10037-101F1 23-56 years, mixed 175.3
Putamen
Scaled Tags Per Million: 180.5
FF:10176-103C5 60 years, female 180.5

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 37.0
Pig sample Sample description nTPM
Caudate
nTPM: 32.8
Samples: 4

Max nTPM: 37.9
Min nTPM: 29.3
Sample A Female 30.3
Sample B Female 33.6
Sample C Male 37.9
Sample D Male 29.3
Putamen
nTPM: 36.7
Samples: 4

Max nTPM: 43.1
Min nTPM: 29.1
Sample A Female 43.1
Sample B Female 29.1
Sample C Male 32.7
Sample D Male 41.8
Septum
nTPM: 30.9
Samples: 4

Max nTPM: 37.3
Min nTPM: 26.8
Sample A Female 37.3
Sample B Female 28.8
Sample C Male 30.5
Sample D Male 26.8
Ventral pallidum
nTPM: 37.0
Samples: 4

Max nTPM: 44.1
Min nTPM: 29.4
Sample A Female 32.6
Sample B Female 29.4
Sample C Male 44.1
Sample D Male 42.0

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 54.2
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 51.7
Samples: 4

Max nTPM: 58.8
Min nTPM: 45.0
Sample A Male 51.4
Sample B Male 58.8
Sample C Female 45.0
Sample D Female 51.7
Septum
nTPM: 54.2
Samples: 4

Max nTPM: 61.8
Min nTPM: 44.3
Sample A Male 44.3
Sample B Male 58.0
Sample C Female 52.6
Sample D Female 61.8
Ventral forebrain
nTPM: 39.9
Samples: 4

Max nTPM: 41.7
Min nTPM: 38.6
Sample A Male 39.2
Sample B Male 39.9
Sample C Female 41.7
Sample D Female 38.6

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 1.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.9
75826580 Antisense, RP_060601_01_B10, Mouse strain C57BL/6J (56 days, male) 1.9
Pallidum
Expression energy: 1.9
75826580 Antisense, RP_060601_01_B10, Mouse strain C57BL/6J (56 days, male) 1.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.