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FAM102A
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:59.0 nTPM
HPA:59.0 nTPM
GTEx:65.6 nTPM
FANTOM5:122.2 Scaled Tags Per Million
Pig:31.5 nTPM
Mouse:44.2 nTPM
Allen mouse:2.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 59.0
Sample id Sample description nTPM
Hippocampus
nTPM: 52.5
2529 Female, age 94, left hemisphere 61.3
1911 Female, age 85, right hemisphere 56.8
2621 Female, age 67, right hemisphere 55.0
1898 Male, age 80, left hemisphere 48.5
2148 Female, age 91, left hemisphere 46.8
1855 Male, age 76, left hemisphere 46.7
Dentate gyrus
nTPM: 52.8
2530 Female, age 94, left hemisphere 69.4
2528 Male, age 74, both hemispheres 55.3
2246 Female, age 85, both hemispheres 53.3
2010 Male, age 76, both hemispheres 50.9
2531 Female, age 67, both hemispheres 48.6
1927 Female, age 91, both hemispheres 39.1
Entorhinal gyrus
nTPM: 54.1
2117 Female, age 91, right hemisphere 68.8
2764 Male, age 80, right hemisphere 56.2
2613 Female, age 94, left hemisphere 53.6
1938 Female, age 85, left hemisphere 49.3
1787 Male, age 76, left hemisphere 48.8
2686 Male, age 75, right hemisphere 47.9
Hippocampus, CA1
nTPM: 49.8
2527 Male, age 74, both hemispheres 59.9
2082 Female, age 91, right hemisphere 53.0
2749 Male, age 80, left hemisphere 51.4
1873 Female, age 85, both hemispheres 48.0
2045 Male, age 76, both hemispheres 36.5
Hippocampus, CA2
nTPM: 52.3
1963 Male, age 80, left hemisphere 65.7
2249 Male, age 74, both hemispheres 53.7
1940 Female, age 85, left hemisphere 53.0
2437 Female, age 94, left hemisphere 50.6
2113 Female, age 91, right hemisphere 50.3
1892 Male, age 76, both hemispheres 40.8
Hippocampus, CA3
nTPM: 47.8
1891 Female, age 85, both hemispheres 52.6
2137 Male, age 80, left hemisphere 52.3
2861 Female, age 67, both hemispheres 49.7
2620 Female, age 94, left hemisphere 45.5
1867 Male, age 76, both hemispheres 43.8
2436 Male, age 74, both hemispheres 42.9
Parahippocampal cortex
nTPM: 49.3
2692 Male, age 74, both hemispheres 67.5
2532 Female, age 72, left hemisphere 58.0
2245 Female, age 91, both hemispheres 51.9
1933 Female, age 85, both hemispheres 50.0
2018 Male, age 76, both hemispheres 48.8
1990 Female, age 91, right hemisphere 45.4
2622 Female, age 67, right hemisphere 44.9
1850 Male, age 80, both hemispheres 43.7
2250 Female, age 67, right hemisphere 42.8
2693 Female, age 94, both hemispheres 39.6
Perirhinal gyrus
nTPM: 43.3
2521 Female, age 94, right hemisphere 48.0
1794 Male, age 80, right hemisphere 47.1
1841 Female, age 85, right hemisphere 43.3
2848 Male, age 76, right hemisphere 40.4
1847 Female, age 91, left hemisphere 38.0
Subiculum
nTPM: 59.0
2042 Male, age 76, both hemispheres 77.1
2619 Male, age 74, both hemispheres 63.0
1901 Male, age 80, both hemispheres 60.0
1977 Female, age 85, both hemispheres 55.0
2438 Female, age 94, left hemisphere 49.9
2729 Female, age 91, right hemisphere 48.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 65.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 65.6
Samples: 197

Max nTPM: 147.8
Min nTPM: 23.0
Std nTPM: 21.0
Median nTPM: 62.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 147.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 139.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 137.4
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 120.2
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 118.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 114.2
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 113.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 110.2
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 109.4
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 108.4
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 106.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 122.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 122.2
FF:10153-102I9 76 years, female 157.6
FF:10169-103B7 60 years, female 86.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 28.5
Samples: 4

Max nTPM: 36.5
Min nTPM: 16.5
Sample A Female 36.5
Sample B Female 28.9
Sample C Male 32.2
Sample D Male 16.5
Entorhinal cortex
nTPM: 22.7
Samples: 4

Max nTPM: 26.0
Min nTPM: 18.9
Sample A Female 24.9
Sample B Female 18.9
Sample C Male 26.0
Sample D Male 21.1
Subiculum
nTPM: 28.7
Samples: 4

Max nTPM: 38.7
Min nTPM: 21.0
Sample A Female 38.7
Sample B Female 27.0
Sample C Male 28.0
Sample D Male 21.0
Ventral hippocampus
nTPM: 31.5
Samples: 4

Max nTPM: 40.3
Min nTPM: 23.2
Sample A Female 32.2
Sample B Female 23.2
Sample C Male 40.3
Sample D Male 30.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 44.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 39.5
Samples: 4

Max nTPM: 43.4
Min nTPM: 35.6
Sample A Male 40.7
Sample B Male 35.6
Sample C Female 38.2
Sample D Female 43.4
Hippocampal formation
nTPM: 44.2
Samples: 4

Max nTPM: 49.6
Min nTPM: 41.4
Sample A Male 41.9
Sample B Male 43.9
Sample C Female 49.6
Sample D Female 41.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.3
75826580 Antisense, RP_060601_01_B10, Mouse strain C57BL/6J (56 days, male) 2.3

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