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POP5
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:5.5 nTPM
HPA:5.5 nTPM
GTEx:21.0 nTPM
FANTOM5:18.0 Scaled Tags Per Million
Pig:10.5 nTPM
Mouse:19.5 nTPM
Allen mouse:1.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047598
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 5.5
Sample id Sample description nTPM
Hippocampus
nTPM: 5.5
1855 Male, age 76, left hemisphere 6.1
1898 Male, age 80, left hemisphere 5.8
2529 Female, age 94, left hemisphere 5.6
2621 Female, age 67, right hemisphere 5.4
2148 Female, age 91, left hemisphere 5.2
1911 Female, age 85, right hemisphere 5.1
Dentate gyrus
nTPM: 5.2
2246 Female, age 85, both hemispheres 5.5
2528 Male, age 74, both hemispheres 5.5
2010 Male, age 76, both hemispheres 5.3
1927 Female, age 91, both hemispheres 5.1
2530 Female, age 94, left hemisphere 5.0
2531 Female, age 67, both hemispheres 4.5
Entorhinal gyrus
nTPM: 5.3
1787 Male, age 76, left hemisphere 5.8
1938 Female, age 85, left hemisphere 5.5
2117 Female, age 91, right hemisphere 5.4
2764 Male, age 80, right hemisphere 5.3
2613 Female, age 94, left hemisphere 4.9
2686 Male, age 75, right hemisphere 4.9
Hippocampus, CA1
nTPM: 5.2
2749 Male, age 80, left hemisphere 5.6
1873 Female, age 85, both hemispheres 5.3
2527 Male, age 74, both hemispheres 5.3
2045 Male, age 76, both hemispheres 5.1
2082 Female, age 91, right hemisphere 4.6
Hippocampus, CA2
nTPM: 5.5
2249 Male, age 74, both hemispheres 6.4
1940 Female, age 85, left hemisphere 5.8
2113 Female, age 91, right hemisphere 5.7
1963 Male, age 80, left hemisphere 5.5
2437 Female, age 94, left hemisphere 5.0
1892 Male, age 76, both hemispheres 4.7
Hippocampus, CA3
nTPM: 5.1
1867 Male, age 76, both hemispheres 5.7
2436 Male, age 74, both hemispheres 5.4
2620 Female, age 94, left hemisphere 5.3
1891 Female, age 85, both hemispheres 5.2
2137 Male, age 80, left hemisphere 4.8
2861 Female, age 67, both hemispheres 4.5
Parahippocampal cortex
nTPM: 5.2
1850 Male, age 80, both hemispheres 5.6
1933 Female, age 85, both hemispheres 5.5
2693 Female, age 94, both hemispheres 5.4
2532 Female, age 72, left hemisphere 5.3
1990 Female, age 91, right hemisphere 5.2
2018 Male, age 76, both hemispheres 5.1
2245 Female, age 91, both hemispheres 5.1
2692 Male, age 74, both hemispheres 5.1
2250 Female, age 67, right hemisphere 4.9
2622 Female, age 67, right hemisphere 4.7
Perirhinal gyrus
nTPM: 4.9
1794 Male, age 80, right hemisphere 5.4
2848 Male, age 76, right hemisphere 5.2
1841 Female, age 85, right hemisphere 4.8
1847 Female, age 91, left hemisphere 4.8
2521 Female, age 94, right hemisphere 4.4
Subiculum
nTPM: 5.1
1901 Male, age 80, both hemispheres 5.5
2619 Male, age 74, both hemispheres 5.5
1977 Female, age 85, both hemispheres 5.4
2729 Female, age 91, right hemisphere 5.4
2042 Male, age 76, both hemispheres 4.9
2438 Female, age 94, left hemisphere 4.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.0
Samples: 197

Max nTPM: 36.1
Min nTPM: 10.2
Std nTPM: 4.7
Median nTPM: 20.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 36.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 36.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 36.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 34.2
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 33.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 32.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 31.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 31.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 30.8
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 29.5
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 29.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 18.0
FF:10169-103B7 60 years, female 23.0
FF:10153-102I9 76 years, female 13.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.4
Samples: 4

Max nTPM: 12.8
Min nTPM: 8.8
Sample A Female 8.8
Sample B Female 10.5
Sample C Male 9.4
Sample D Male 12.8
Entorhinal cortex
nTPM: 10.3
Samples: 4

Max nTPM: 11.4
Min nTPM: 9.8
Sample A Female 10.0
Sample B Female 9.8
Sample C Male 10.1
Sample D Male 11.4
Subiculum
nTPM: 9.9
Samples: 4

Max nTPM: 10.6
Min nTPM: 9.2
Sample A Female 9.2
Sample B Female 9.8
Sample C Male 9.9
Sample D Male 10.6
Ventral hippocampus
nTPM: 10.5
Samples: 4

Max nTPM: 12.3
Min nTPM: 9.6
Sample A Female 10.6
Sample B Female 12.3
Sample C Male 9.6
Sample D Male 9.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.6
Samples: 4

Max nTPM: 20.3
Min nTPM: 16.1
Sample A Male 17.3
Sample B Male 20.3
Sample C Female 16.6
Sample D Female 16.1
Hippocampal formation
nTPM: 19.6
Samples: 4

Max nTPM: 20.4
Min nTPM: 18.4
Sample A Male 19.2
Sample B Male 18.4
Sample C Female 20.2
Sample D Female 20.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.4
67815954 Antisense, RP_040920_02_C07, Mouse strain C57BL/6J (56 days, male) 1.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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