ABOUTMENU
HELP
NEWS
CACNB3
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:72.6 nTPM
HPA:72.6 nTPM
GTEx:50.7 nTPM
FANTOM5:22.1 Scaled Tags Per Million
Pig:81.4 nTPM
Mouse:146.4 nTPM
Allen mouse:11.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 72.6
Sample id Sample description nTPM
Hippocampus
nTPM: 58.4
2621 Female, age 67, right hemisphere 61.2
1898 Male, age 80, left hemisphere 60.4
2529 Female, age 94, left hemisphere 58.8
2148 Female, age 91, left hemisphere 58.0
1911 Female, age 85, right hemisphere 57.2
1855 Male, age 76, left hemisphere 54.9
Dentate gyrus
nTPM: 59.6
2531 Female, age 67, both hemispheres 67.2
1927 Female, age 91, both hemispheres 61.4
2528 Male, age 74, both hemispheres 60.4
2246 Female, age 85, both hemispheres 58.8
2530 Female, age 94, left hemisphere 55.8
2010 Male, age 76, both hemispheres 54.2
Entorhinal gyrus
nTPM: 65.7
2613 Female, age 94, left hemisphere 78.0
2764 Male, age 80, right hemisphere 69.8
1787 Male, age 76, left hemisphere 67.4
2686 Male, age 75, right hemisphere 64.1
1938 Female, age 85, left hemisphere 62.0
2117 Female, age 91, right hemisphere 52.9
Hippocampus, CA1
nTPM: 59.7
2749 Male, age 80, left hemisphere 64.9
2527 Male, age 74, both hemispheres 62.2
2082 Female, age 91, right hemisphere 59.3
1873 Female, age 85, both hemispheres 56.3
2045 Male, age 76, both hemispheres 55.6
Hippocampus, CA2
nTPM: 59.8
1940 Female, age 85, left hemisphere 63.7
2437 Female, age 94, left hemisphere 61.1
2113 Female, age 91, right hemisphere 60.2
2249 Male, age 74, both hemispheres 58.4
1892 Male, age 76, both hemispheres 58.3
1963 Male, age 80, left hemisphere 57.4
Hippocampus, CA3
nTPM: 61.2
2861 Female, age 67, both hemispheres 69.7
2137 Male, age 80, left hemisphere 67.3
2620 Female, age 94, left hemisphere 64.9
2436 Male, age 74, both hemispheres 57.4
1891 Female, age 85, both hemispheres 55.3
1867 Male, age 76, both hemispheres 52.9
Parahippocampal cortex
nTPM: 66.1
2245 Female, age 91, both hemispheres 72.2
2622 Female, age 67, right hemisphere 71.0
1850 Male, age 80, both hemispheres 69.9
2693 Female, age 94, both hemispheres 69.4
2532 Female, age 72, left hemisphere 67.8
1933 Female, age 85, both hemispheres 66.0
2250 Female, age 67, right hemisphere 63.4
1990 Female, age 91, right hemisphere 62.8
2692 Male, age 74, both hemispheres 61.7
2018 Male, age 76, both hemispheres 56.9
Perirhinal gyrus
nTPM: 72.6
2521 Female, age 94, right hemisphere 76.8
1847 Female, age 91, left hemisphere 75.4
1794 Male, age 80, right hemisphere 73.6
1841 Female, age 85, right hemisphere 71.4
2848 Male, age 76, right hemisphere 66.0
Subiculum
nTPM: 56.3
2619 Male, age 74, both hemispheres 62.0
1977 Female, age 85, both hemispheres 57.7
1901 Male, age 80, both hemispheres 56.8
2729 Female, age 91, right hemisphere 55.6
2438 Female, age 94, left hemisphere 54.1
2042 Male, age 76, both hemispheres 51.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 50.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 50.7
Samples: 197

Max nTPM: 156.9
Min nTPM: 2.0
Std nTPM: 27.6
Median nTPM: 49.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 156.9
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 140.9
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 131.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 128.5
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 113.5
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 112.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 111.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 109.6
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 105.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 101.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 99.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.1
FF:10153-102I9 76 years, female 22.2
FF:10169-103B7 60 years, female 21.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 81.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 40.6
Samples: 4

Max nTPM: 52.0
Min nTPM: 31.9
Sample A Female 52.0
Sample B Female 46.0
Sample C Male 31.9
Sample D Male 32.3
Entorhinal cortex
nTPM: 81.5
Samples: 4

Max nTPM: 97.4
Min nTPM: 66.1
Sample A Female 89.0
Sample B Female 73.3
Sample C Male 97.4
Sample D Male 66.1
Subiculum
nTPM: 58.0
Samples: 4

Max nTPM: 78.3
Min nTPM: 49.1
Sample A Female 78.3
Sample B Female 53.5
Sample C Male 49.1
Sample D Male 51.1
Ventral hippocampus
nTPM: 40.0
Samples: 4

Max nTPM: 48.5
Min nTPM: 31.2
Sample A Female 37.3
Sample B Female 31.2
Sample C Male 48.5
Sample D Male 42.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 146.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 146.4
Samples: 4

Max nTPM: 159.3
Min nTPM: 132.5
Sample A Male 151.0
Sample B Male 159.3
Sample C Female 132.5
Sample D Female 142.8
Hippocampal formation
nTPM: 130.0
Samples: 4

Max nTPM: 134.5
Min nTPM: 126.6
Sample A Male 134.5
Sample B Male 132.1
Sample C Female 126.6
Sample D Female 126.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.9
70560340 Antisense, RP_050331_01_E04, Mouse strain C57BL/6J (56 days, male) 11.9
69236939 Antisense, RP_050331_01_E04, Mouse strain C57BL/6J (56 days, male) 11.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.