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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:56.8 nTPM
HPA:56.8 nTPM
GTEx:68.9 nTPM
FANTOM5:120.2 Scaled Tags Per Million
Pig:105.1 nTPM
Mouse:138.3 nTPM
Allen mouse:5.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 56.8
Sample id Sample description nTPM
Hippocampus
nTPM: 53.5
1898 Male, age 80, left hemisphere 58.4
1855 Male, age 76, left hemisphere 55.5
1911 Female, age 85, right hemisphere 53.8
2621 Female, age 67, right hemisphere 51.9
2529 Female, age 94, left hemisphere 51.6
2148 Female, age 91, left hemisphere 50.0
Dentate gyrus
nTPM: 53.0
2010 Male, age 76, both hemispheres 58.3
1927 Female, age 91, both hemispheres 57.1
2528 Male, age 74, both hemispheres 53.5
2246 Female, age 85, both hemispheres 52.4
2530 Female, age 94, left hemisphere 49.4
2531 Female, age 67, both hemispheres 47.3
Entorhinal gyrus
nTPM: 49.4
1938 Female, age 85, left hemisphere 54.2
1787 Male, age 76, left hemisphere 51.1
2117 Female, age 91, right hemisphere 50.8
2764 Male, age 80, right hemisphere 48.2
2613 Female, age 94, left hemisphere 46.3
2686 Male, age 75, right hemisphere 45.8
Hippocampus, CA1
nTPM: 56.8
2749 Male, age 80, left hemisphere 64.4
2045 Male, age 76, both hemispheres 57.7
1873 Female, age 85, both hemispheres 56.9
2527 Male, age 74, both hemispheres 55.1
2082 Female, age 91, right hemisphere 50.1
Hippocampus, CA2
nTPM: 54.6
2249 Male, age 74, both hemispheres 60.0
1892 Male, age 76, both hemispheres 59.3
1963 Male, age 80, left hemisphere 55.8
1940 Female, age 85, left hemisphere 52.9
2113 Female, age 91, right hemisphere 50.2
2437 Female, age 94, left hemisphere 49.3
Hippocampus, CA3
nTPM: 54.7
2436 Male, age 74, both hemispheres 61.3
2137 Male, age 80, left hemisphere 60.8
1867 Male, age 76, both hemispheres 58.8
1891 Female, age 85, both hemispheres 54.0
2620 Female, age 94, left hemisphere 48.5
2861 Female, age 67, both hemispheres 44.8
Parahippocampal cortex
nTPM: 51.6
2250 Female, age 67, right hemisphere 54.2
1850 Male, age 80, both hemispheres 54.1
2018 Male, age 76, both hemispheres 54.0
1933 Female, age 85, both hemispheres 53.2
1990 Female, age 91, right hemisphere 52.5
2693 Female, age 94, both hemispheres 51.2
2245 Female, age 91, both hemispheres 50.9
2692 Male, age 74, both hemispheres 50.8
2532 Female, age 72, left hemisphere 50.4
2622 Female, age 67, right hemisphere 44.7
Perirhinal gyrus
nTPM: 54.0
1841 Female, age 85, right hemisphere 56.6
1847 Female, age 91, left hemisphere 55.7
1794 Male, age 80, right hemisphere 54.4
2521 Female, age 94, right hemisphere 53.3
2848 Male, age 76, right hemisphere 49.8
Subiculum
nTPM: 53.3
1901 Male, age 80, both hemispheres 57.2
2042 Male, age 76, both hemispheres 56.0
2438 Female, age 94, left hemisphere 52.9
1977 Female, age 85, both hemispheres 52.7
2619 Male, age 74, both hemispheres 51.1
2729 Female, age 91, right hemisphere 49.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 68.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 68.9
Samples: 197

Max nTPM: 133.0
Min nTPM: 39.9
Std nTPM: 15.0
Median nTPM: 65.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 133.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 121.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 119.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 108.2
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 107.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 104.1
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 103.5
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 100.0
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 99.8
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 96.6
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 95.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 120.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 120.2
FF:10169-103B7 60 years, female 152.7
FF:10153-102I9 76 years, female 87.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 105.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 105.2
Samples: 4

Max nTPM: 134.2
Min nTPM: 82.1
Sample A Female 134.2
Sample B Female 102.7
Sample C Male 101.6
Sample D Male 82.1
Entorhinal cortex
nTPM: 80.5
Samples: 4

Max nTPM: 90.5
Min nTPM: 68.4
Sample A Female 82.8
Sample B Female 90.5
Sample C Male 80.2
Sample D Male 68.4
Subiculum
nTPM: 83.7
Samples: 4

Max nTPM: 100.8
Min nTPM: 77.0
Sample A Female 100.8
Sample B Female 79.9
Sample C Male 77.0
Sample D Male 77.0
Ventral hippocampus
nTPM: 90.3
Samples: 4

Max nTPM: 107.8
Min nTPM: 70.4
Sample A Female 90.0
Sample B Female 70.4
Sample C Male 93.0
Sample D Male 107.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 138.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 119.6
Samples: 4

Max nTPM: 133.9
Min nTPM: 109.2
Sample A Male 109.9
Sample B Male 109.2
Sample C Female 133.9
Sample D Female 125.3
Hippocampal formation
nTPM: 138.3
Samples: 4

Max nTPM: 152.3
Min nTPM: 117.2
Sample A Male 151.8
Sample B Male 131.8
Sample C Female 152.3
Sample D Female 117.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.0
69526785 Antisense, RP_050421_01_F04, Mouse strain C57BL/6J (56 days, male) 5.0

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The Human Protein Atlas

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