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CNBP
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:170.6 nTPM
HPA:170.6 nTPM
GTEx:184.0 nTPM
FANTOM5:168.4 Scaled Tags Per Million
Pig:43.5 nTPM
Mouse:287.8 nTPM
Allen mouse:21.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 170.6
Sample id Sample description nTPM
Hippocampus
nTPM: 167.3
1898 Male, age 80, left hemisphere 177.5
2529 Female, age 94, left hemisphere 171.3
1911 Female, age 85, right hemisphere 166.7
2621 Female, age 67, right hemisphere 163.7
1855 Male, age 76, left hemisphere 162.5
2148 Female, age 91, left hemisphere 162.3
Dentate gyrus
nTPM: 164.2
2010 Male, age 76, both hemispheres 171.7
2528 Male, age 74, both hemispheres 168.3
1927 Female, age 91, both hemispheres 168.0
2246 Female, age 85, both hemispheres 162.5
2530 Female, age 94, left hemisphere 161.9
2531 Female, age 67, both hemispheres 153.1
Entorhinal gyrus
nTPM: 163.1
1938 Female, age 85, left hemisphere 172.4
2117 Female, age 91, right hemisphere 171.0
1787 Male, age 76, left hemisphere 166.1
2764 Male, age 80, right hemisphere 165.6
2686 Male, age 75, right hemisphere 154.6
2613 Female, age 94, left hemisphere 149.0
Hippocampus, CA1
nTPM: 170.6
2749 Male, age 80, left hemisphere 179.2
2045 Male, age 76, both hemispheres 170.1
1873 Female, age 85, both hemispheres 169.9
2527 Male, age 74, both hemispheres 169.8
2082 Female, age 91, right hemisphere 164.1
Hippocampus, CA2
nTPM: 168.9
2249 Male, age 74, both hemispheres 178.1
1963 Male, age 80, left hemisphere 174.1
1892 Male, age 76, both hemispheres 171.1
1940 Female, age 85, left hemisphere 164.5
2113 Female, age 91, right hemisphere 164.3
2437 Female, age 94, left hemisphere 161.1
Hippocampus, CA3
nTPM: 166.7
1891 Female, age 85, both hemispheres 175.1
1867 Male, age 76, both hemispheres 173.2
2137 Male, age 80, left hemisphere 171.4
2436 Male, age 74, both hemispheres 168.4
2620 Female, age 94, left hemisphere 160.2
2861 Female, age 67, both hemispheres 152.1
Parahippocampal cortex
nTPM: 163.5
1850 Male, age 80, both hemispheres 172.6
2018 Male, age 76, both hemispheres 170.1
1990 Female, age 91, right hemisphere 169.2
1933 Female, age 85, both hemispheres 168.4
2250 Female, age 67, right hemisphere 167.8
2532 Female, age 72, left hemisphere 161.5
2245 Female, age 91, both hemispheres 159.9
2692 Male, age 74, both hemispheres 157.6
2693 Female, age 94, both hemispheres 157.2
2622 Female, age 67, right hemisphere 150.2
Perirhinal gyrus
nTPM: 170.1
1841 Female, age 85, right hemisphere 178.4
1847 Female, age 91, left hemisphere 174.5
1794 Male, age 80, right hemisphere 172.9
2521 Female, age 94, right hemisphere 162.7
2848 Male, age 76, right hemisphere 162.2
Subiculum
nTPM: 168.6
1977 Female, age 85, both hemispheres 176.1
2042 Male, age 76, both hemispheres 174.0
1901 Male, age 80, both hemispheres 169.2
2729 Female, age 91, right hemisphere 166.6
2619 Male, age 74, both hemispheres 166.0
2438 Female, age 94, left hemisphere 159.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 184.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 184.0
Samples: 197

Max nTPM: 457.7
Min nTPM: 127.7
Std nTPM: 34.0
Median nTPM: 179.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 457.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 303.9
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 267.3
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 253.5
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 246.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 244.2
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 243.0
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 242.6
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 237.9
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 235.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 234.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 168.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 168.4
FF:10153-102I9 76 years, female 173.7
FF:10169-103B7 60 years, female 163.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 43.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 43.5
Samples: 4

Max nTPM: 47.7
Min nTPM: 41.8
Sample A Female 47.7
Sample B Female 42.3
Sample C Male 42.3
Sample D Male 41.8
Entorhinal cortex
nTPM: 41.4
Samples: 4

Max nTPM: 47.5
Min nTPM: 37.6
Sample A Female 39.8
Sample B Female 47.5
Sample C Male 40.7
Sample D Male 37.6
Subiculum
nTPM: 41.4
Samples: 4

Max nTPM: 46.8
Min nTPM: 38.3
Sample A Female 46.8
Sample B Female 40.3
Sample C Male 38.3
Sample D Male 40.3
Ventral hippocampus
nTPM: 41.1
Samples: 4

Max nTPM: 44.0
Min nTPM: 39.1
Sample A Female 44.0
Sample B Female 39.1
Sample C Male 41.1
Sample D Male 40.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 287.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 280.3
Samples: 4

Max nTPM: 299.0
Min nTPM: 265.8
Sample A Male 274.4
Sample B Male 299.0
Sample C Female 282.1
Sample D Female 265.8
Hippocampal formation
nTPM: 287.8
Samples: 4

Max nTPM: 322.8
Min nTPM: 267.3
Sample A Male 322.8
Sample B Male 278.7
Sample C Female 282.4
Sample D Female 267.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 21.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 21.4
70593287 Antisense, RP_050407_01_G07, Mouse strain C57BL/6J (56 days, male) 21.4

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The Human Protein Atlas

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