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AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		63.837
RNA expressioni
Consensus:165.6 nTPM
HPA:165.6 nTPM
GTEx:172.0 nTPM
FANTOM5:335.3 Scaled Tags Per Million
Pig:212.9 nTPM
Mouse:556.1 nTPM
Allen mouse:23.2 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA026918
Amygdala mean intensity 63.837
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 44.729
Basal medial amygdaloid nucleus 63.837
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 60.805
Cortical amygdala 19.846
Central amygdala 29.675
Medial amygdaloid nucleus 43.640

AMYGDALA - HPA Brain RNA-seq
Max nTPM 165.6
Sample id Sample description nTPM
Amygdala
nTPM: 66.3
2814 Male, age 76, right hemisphere 126.5
1987 Female, age 91, left hemisphere 82.2
2517 Female, age 94, left hemisphere 59.2
2514 Male, age 75, right hemisphere 35.9
2695 Female, age 67, right hemisphere 27.9
Basal amygdala
nTPM: 88.0
2243 Female, age 91, right hemisphere 139.7
2110 Male, age 80, left hemisphere 124.7
2685 Female, age 94, left hemisphere 93.8
1955 Male, age 76, both hemispheres 89.7
2827 Female, age 67, right hemisphere 46.6
2609 Male, age 75, right hemisphere 33.6
Central amygdala
nTPM: 84.6
2239 Male, age 80, left hemisphere 118.9
1905 Male, age 76, both hemispheres 114.0
2826 Female, age 94, left hemisphere 83.0
2701 Female, age 91, right hemisphere 73.0
2515 Male, age 75, right hemisphere 34.3
Corticomedial amygdala
nTPM: 94.3
2829 Male, age 80, left hemisphere 153.1
2242 Female, age 91, right hemisphere 118.3
2429 Female, age 94, left hemisphere 96.2
2240 Male, age 76, both hemispheres 89.2
2535 Female, age 67, right hemisphere 76.3
2428 Male, age 75, right hemisphere 32.7
Lateral amygdala
nTPM: 71.7
1883 Male, age 76, both hemispheres 136.3
2534 Female, age 94, left hemisphere 116.4
2255 Female, age 91, right hemisphere 59.1
2256 Male, age 80, left hemisphere 54.9
2516 Male, age 75, right hemisphere 34.8
2830 Female, age 67, right hemisphere 28.8
Stria terminalis, bed nucleus
nTPM: 165.6
1974 Female, age 91, both hemispheres 251.2
2486 Female, age 94, both hemispheres 164.0
2201 Male, age 74, unknown 81.6

AMYGDALA - GTEx RNA-seqi
Average nTPM 172.0
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 172.0
Samples: 152

Max nTPM: 432.3
Min nTPM: 57.1
Std nTPM: 82.2
Median nTPM: 156.3
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 432.3
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 409.5
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 397.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 387.0
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 385.0
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 361.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 357.4
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 356.2
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 334.1
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 295.6
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 294.7
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 335.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 335.3
FF:10151-102I7 76 years, female 335.3

AMYGDALA - Pig RNA-seqi
Average nTPM 212.9
Pig sample Sample description nTPM
Amygdala
nTPM: 212.9
Samples: 4

Max nTPM: 317.3
Min nTPM: 148.1
Sample A Female 317.3
Sample B Female 148.1
Sample C Male 172.7
Sample D Male 213.4

AMYGDALA - Mouse RNA-seqi
Average nTPM 556.1
Mouse sample Sample description nTPM
Amygdala
nTPM: 556.1
Samples: 4

Max nTPM: 598.6
Min nTPM: 531.9
Sample A Male 598.6
Sample B Male 538.6
Sample C Female 555.2
Sample D Female 531.9

AMYGDALA - Allen Mouse ISHi
Max Expression energy 23.2
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 23.2
68443009 Antisense, RP_050111_01_B11, Mouse strain C57BL/6J (56 days, male) 30.4
1124 Antisense, RP_Baylor_103127, Mouse strain C57BL/6J (56 days, male) 15.9
1125 Antisense, RP_Baylor_103127, Mouse strain C57BL/6J (56 days, male) 12.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.