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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:753.9 nTPM
HPA:753.9 nTPM
GTEx:664.8 nTPM
FANTOM5:246.8 Scaled Tags Per Million
Pig:6.9 nTPM
Mouse:238.7 nTPM
Allen mouse:17.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 753.9
Sample id Sample description nTPM
Hippocampus
nTPM: 753.9
1898 Male, age 80, left hemisphere 780.9
1855 Male, age 76, left hemisphere 759.8
2621 Female, age 67, right hemisphere 751.2
2529 Female, age 94, left hemisphere 750.6
1911 Female, age 85, right hemisphere 743.6
2148 Female, age 91, left hemisphere 737.3
Dentate gyrus
nTPM: 740.1
2010 Male, age 76, both hemispheres 755.1
2528 Male, age 74, both hemispheres 746.1
2530 Female, age 94, left hemisphere 744.3
1927 Female, age 91, both hemispheres 741.9
2246 Female, age 85, both hemispheres 736.5
2531 Female, age 67, both hemispheres 716.7
Entorhinal gyrus
nTPM: 742.5
2117 Female, age 91, right hemisphere 765.7
2764 Male, age 80, right hemisphere 759.1
1938 Female, age 85, left hemisphere 755.7
1787 Male, age 76, left hemisphere 740.2
2686 Male, age 75, right hemisphere 720.0
2613 Female, age 94, left hemisphere 714.2
Hippocampus, CA1
nTPM: 746.9
2749 Male, age 80, left hemisphere 769.9
2527 Male, age 74, both hemispheres 743.7
2045 Male, age 76, both hemispheres 741.6
2082 Female, age 91, right hemisphere 740.6
1873 Female, age 85, both hemispheres 738.4
Hippocampus, CA2
nTPM: 749.3
1963 Male, age 80, left hemisphere 764.2
2249 Male, age 74, both hemispheres 761.8
1892 Male, age 76, both hemispheres 750.4
1940 Female, age 85, left hemisphere 742.1
2113 Female, age 91, right hemisphere 741.4
2437 Female, age 94, left hemisphere 736.0
Hippocampus, CA3
nTPM: 741.0
1867 Male, age 76, both hemispheres 755.3
2436 Male, age 74, both hemispheres 752.3
2137 Male, age 80, left hemisphere 747.5
1891 Female, age 85, both hemispheres 746.9
2620 Female, age 94, left hemisphere 723.5
2861 Female, age 67, both hemispheres 720.4
Parahippocampal cortex
nTPM: 738.2
2018 Male, age 76, both hemispheres 760.9
1850 Male, age 80, both hemispheres 751.6
1933 Female, age 85, both hemispheres 745.6
2250 Female, age 67, right hemisphere 742.0
1990 Female, age 91, right hemisphere 740.8
2245 Female, age 91, both hemispheres 736.6
2692 Male, age 74, both hemispheres 736.0
2532 Female, age 72, left hemisphere 732.3
2693 Female, age 94, both hemispheres 721.6
2622 Female, age 67, right hemisphere 714.8
Perirhinal gyrus
nTPM: 750.2
1847 Female, age 91, left hemisphere 769.0
1794 Male, age 80, right hemisphere 763.4
1841 Female, age 85, right hemisphere 754.3
2848 Male, age 76, right hemisphere 737.5
2521 Female, age 94, right hemisphere 726.6
Subiculum
nTPM: 751.4
1901 Male, age 80, both hemispheres 762.4
2042 Male, age 76, both hemispheres 758.3
2619 Male, age 74, both hemispheres 754.6
1977 Female, age 85, both hemispheres 746.7
2438 Female, age 94, left hemisphere 743.1
2729 Female, age 91, right hemisphere 743.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 664.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 664.8
Samples: 197

Max nTPM: 1090.5
Min nTPM: 397.8
Std nTPM: 112.1
Median nTPM: 644.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1090.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1047.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 941.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 910.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 906.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 902.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 901.9
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 900.1
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 895.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 890.1
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 889.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 246.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 246.8
FF:10153-102I9 76 years, female 259.2
FF:10169-103B7 60 years, female 234.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 6.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 6.9
Samples: 4

Max nTPM: 11.4
Min nTPM: 4.0
Sample A Female 4.0
Sample B Female 6.9
Sample C Male 11.4
Sample D Male 5.3
Entorhinal cortex
nTPM: 5.4
Samples: 4

Max nTPM: 6.1
Min nTPM: 3.8
Sample A Female 3.8
Sample B Female 5.8
Sample C Male 5.7
Sample D Male 6.1
Subiculum
nTPM: 5.7
Samples: 4

Max nTPM: 7.5
Min nTPM: 3.1
Sample A Female 3.1
Sample B Female 7.5
Sample C Male 5.3
Sample D Male 7.0
Ventral hippocampus
nTPM: 6.3
Samples: 4

Max nTPM: 9.0
Min nTPM: 4.1
Sample A Female 5.9
Sample B Female 9.0
Sample C Male 4.1
Sample D Male 6.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 238.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 220.6
Samples: 4

Max nTPM: 238.6
Min nTPM: 205.4
Sample A Male 205.4
Sample B Male 208.7
Sample C Female 238.6
Sample D Female 229.7
Hippocampal formation
nTPM: 238.7
Samples: 4

Max nTPM: 264.5
Min nTPM: 215.5
Sample A Male 264.5
Sample B Male 215.5
Sample C Female 250.4
Sample D Female 224.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.9
2245 Antisense, RP_040420_01_B03, Mouse strain C57BL/6J (56 days, male) 17.9
2246 Antisense, RP_040420_01_B03, Mouse strain C57BL/6J (56 days, male) 15.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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