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AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:62.9 nTPM
HPA:62.9 nTPM
GTEx:123.9 nTPM
FANTOM5:209.1 Scaled Tags Per Million
Pig:10.8 nTPM
Mouse:17.6 nTPM
Allen mouse:4.3 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 62.9
Sample id Sample description nTPM
Amygdala
nTPM: 62.9
1987 Female, age 91, left hemisphere 113.4
2517 Female, age 94, left hemisphere 53.1
2514 Male, age 75, right hemisphere 50.7
2695 Female, age 67, right hemisphere 49.6
2814 Male, age 76, right hemisphere 47.9
Basal amygdala
nTPM: 46.8
2827 Female, age 67, right hemisphere 68.0
2110 Male, age 80, left hemisphere 53.4
1955 Male, age 76, both hemispheres 46.9
2685 Female, age 94, left hemisphere 42.3
2609 Male, age 75, right hemisphere 36.1
2243 Female, age 91, right hemisphere 34.2
Central amygdala
nTPM: 54.1
2701 Female, age 91, right hemisphere 82.7
2515 Male, age 75, right hemisphere 60.5
2826 Female, age 94, left hemisphere 44.0
2239 Male, age 80, left hemisphere 43.8
1905 Male, age 76, both hemispheres 39.6
Corticomedial amygdala
nTPM: 50.6
2242 Female, age 91, right hemisphere 74.1
2535 Female, age 67, right hemisphere 53.7
2240 Male, age 76, both hemispheres 52.8
2429 Female, age 94, left hemisphere 44.5
2428 Male, age 75, right hemisphere 39.4
2829 Male, age 80, left hemisphere 38.8
Lateral amygdala
nTPM: 55.1
2830 Female, age 67, right hemisphere 82.3
2256 Male, age 80, left hemisphere 71.9
2255 Female, age 91, right hemisphere 58.1
2534 Female, age 94, left hemisphere 42.2
1883 Male, age 76, both hemispheres 41.2
2516 Male, age 75, right hemisphere 34.8
Stria terminalis, bed nucleus
nTPM: 41.0
1974 Female, age 91, both hemispheres 46.4
2486 Female, age 94, both hemispheres 45.3
2201 Male, age 74, unknown 31.4

AMYGDALA - GTEx RNA-seqi
Average nTPM 123.9
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 123.9
Samples: 152

Max nTPM: 1472.5
Min nTPM: 3.8
Std nTPM: 160.0
Median nTPM: 69.2
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 1472.5
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 576.8
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 519.2
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 508.2
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 488.7
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 482.9
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 472.8
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 421.4
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 401.7
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 390.5
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 325.0
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 209.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 209.1
FF:10151-102I7 76 years, female 209.1

AMYGDALA - Pig RNA-seqi
Average nTPM 10.8
Pig sample Sample description nTPM
Amygdala
nTPM: 10.8
Samples: 4

Max nTPM: 14.7
Min nTPM: 5.5
Sample A Female 14.7
Sample B Female 5.5
Sample C Male 14.4
Sample D Male 8.6

AMYGDALA - Mouse RNA-seqi
Average nTPM 17.6
Mouse sample Sample description nTPM
Amygdala
nTPM: 17.6
Samples: 4

Max nTPM: 23.1
Min nTPM: 10.6
Sample A Male 15.3
Sample B Male 23.1
Sample C Female 10.6
Sample D Female 21.4

AMYGDALA - Allen Mouse ISHi
Max Expression energy 4.3
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 4.3
80342219 Antisense, RP_080109_01_B10, Mouse strain C57BL/6J (56 days, male) 4.8
459 Antisense, RP_Baylor_253909, Mouse strain C57BL/6J (56 days, male) 3.7
79912554 Antisense, RP_080109_01_B10, Mouse strain C57BL/6J (56 days, male) 2.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.