ABOUTMENU
HELP
NEWS
FOS
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:58.9 nTPM
HPA:58.9 nTPM
GTEx:149.6 nTPM
FANTOM5:237.7 Scaled Tags Per Million
Pig:29.0 nTPM
Mouse:26.8 nTPM
Allen mouse:2.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018531
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 58.9
Sample id Sample description nTPM
Hippocampus
nTPM: 56.6
1855 Male, age 76, left hemisphere 64.6
1898 Male, age 80, left hemisphere 64.3
2529 Female, age 94, left hemisphere 58.8
2621 Female, age 67, right hemisphere 58.1
1911 Female, age 85, right hemisphere 50.3
2148 Female, age 91, left hemisphere 43.5
Dentate gyrus
nTPM: 50.7
2531 Female, age 67, both hemispheres 57.4
2010 Male, age 76, both hemispheres 56.9
2528 Male, age 74, both hemispheres 53.5
2530 Female, age 94, left hemisphere 49.8
1927 Female, age 91, both hemispheres 49.6
2246 Female, age 85, both hemispheres 36.9
Entorhinal gyrus
nTPM: 49.6
2117 Female, age 91, right hemisphere 70.2
1787 Male, age 76, left hemisphere 64.0
2686 Male, age 75, right hemisphere 49.5
2764 Male, age 80, right hemisphere 40.5
1938 Female, age 85, left hemisphere 38.3
2613 Female, age 94, left hemisphere 35.0
Hippocampus, CA1
nTPM: 51.7
2045 Male, age 76, both hemispheres 66.2
1873 Female, age 85, both hemispheres 56.6
2082 Female, age 91, right hemisphere 54.9
2749 Male, age 80, left hemisphere 45.7
2527 Male, age 74, both hemispheres 35.0
Hippocampus, CA2
nTPM: 58.9
1940 Female, age 85, left hemisphere 79.0
2249 Male, age 74, both hemispheres 72.9
1892 Male, age 76, both hemispheres 57.5
2113 Female, age 91, right hemisphere 51.4
2437 Female, age 94, left hemisphere 49.1
1963 Male, age 80, left hemisphere 43.4
Hippocampus, CA3
nTPM: 56.3
2436 Male, age 74, both hemispheres 90.9
1867 Male, age 76, both hemispheres 64.1
2137 Male, age 80, left hemisphere 55.7
2861 Female, age 67, both hemispheres 50.3
1891 Female, age 85, both hemispheres 39.2
2620 Female, age 94, left hemisphere 37.5
Parahippocampal cortex
nTPM: 43.0
2250 Female, age 67, right hemisphere 56.3
2018 Male, age 76, both hemispheres 53.6
2245 Female, age 91, both hemispheres 52.0
1990 Female, age 91, right hemisphere 50.4
2622 Female, age 67, right hemisphere 43.3
1933 Female, age 85, both hemispheres 38.6
2693 Female, age 94, both hemispheres 37.1
2532 Female, age 72, left hemisphere 35.2
1850 Male, age 80, both hemispheres 34.0
2692 Male, age 74, both hemispheres 29.4
Perirhinal gyrus
nTPM: 49.4
2848 Male, age 76, right hemisphere 68.1
1841 Female, age 85, right hemisphere 55.5
2521 Female, age 94, right hemisphere 41.8
1794 Male, age 80, right hemisphere 41.5
1847 Female, age 91, left hemisphere 39.9
Subiculum
nTPM: 49.8
2042 Male, age 76, both hemispheres 63.6
2729 Female, age 91, right hemisphere 62.4
1901 Male, age 80, both hemispheres 52.2
2619 Male, age 74, both hemispheres 43.6
2438 Female, age 94, left hemisphere 41.0
1977 Female, age 85, both hemispheres 36.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 149.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 149.6
Samples: 197

Max nTPM: 786.7
Min nTPM: 8.5
Std nTPM: 145.3
Median nTPM: 87.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 786.7
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 749.8
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 724.5
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 587.5
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 556.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 543.0
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 539.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 501.8
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 476.8
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 462.2
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 428.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 237.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 237.7
FF:10169-103B7 60 years, female 303.4
FF:10153-102I9 76 years, female 172.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 29.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 11.1
Samples: 4

Max nTPM: 24.3
Min nTPM: 4.9
Sample A Female 9.3
Sample B Female 4.9
Sample C Male 24.3
Sample D Male 5.7
Entorhinal cortex
nTPM: 29.0
Samples: 4

Max nTPM: 46.4
Min nTPM: 16.0
Sample A Female 46.4
Sample B Female 16.0
Sample C Male 26.1
Sample D Male 27.5
Subiculum
nTPM: 24.8
Samples: 4

Max nTPM: 41.9
Min nTPM: 8.4
Sample A Female 22.7
Sample B Female 8.4
Sample C Male 41.9
Sample D Male 26.3
Ventral hippocampus
nTPM: 18.4
Samples: 4

Max nTPM: 41.2
Min nTPM: 8.8
Sample A Female 10.6
Sample B Female 8.8
Sample C Male 41.2
Sample D Male 13.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 26.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 26.8
Samples: 4

Max nTPM: 51.3
Min nTPM: 10.0
Sample A Male 25.2
Sample B Male 51.3
Sample C Female 10.0
Sample D Female 20.6
Hippocampal formation
nTPM: 7.4
Samples: 4

Max nTPM: 9.1
Min nTPM: 5.2
Sample A Male 9.1
Sample B Male 8.4
Sample C Female 5.2
Sample D Female 6.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.8
80342219 Antisense, RP_080109_01_B10, Mouse strain C57BL/6J (56 days, male) 2.9
79912554 Antisense, RP_080109_01_B10, Mouse strain C57BL/6J (56 days, male) 2.8
459 Antisense, RP_Baylor_253909, Mouse strain C57BL/6J (56 days, male) 2.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.