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HARS1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:67.8 nTPM
HPA:67.8 nTPM
GTEx:53.0 nTPM
FANTOM5:62.6 Scaled Tags Per Million
Pig:20.7 nTPM
Mouse:98.1 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036539
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 67.8
Sample id Sample description nTPM
Hippocampus
nTPM: 61.3
1898 Male, age 80, left hemisphere 67.0
2621 Female, age 67, right hemisphere 63.6
2529 Female, age 94, left hemisphere 59.8
2148 Female, age 91, left hemisphere 59.6
1855 Male, age 76, left hemisphere 59.5
1911 Female, age 85, right hemisphere 58.4
Dentate gyrus
nTPM: 60.1
1927 Female, age 91, both hemispheres 63.6
2530 Female, age 94, left hemisphere 62.3
2010 Male, age 76, both hemispheres 60.7
2531 Female, age 67, both hemispheres 60.0
2246 Female, age 85, both hemispheres 58.8
2528 Male, age 74, both hemispheres 55.4
Entorhinal gyrus
nTPM: 64.0
2613 Female, age 94, left hemisphere 66.9
2764 Male, age 80, right hemisphere 66.3
1938 Female, age 85, left hemisphere 65.6
2686 Male, age 75, right hemisphere 64.8
1787 Male, age 76, left hemisphere 62.8
2117 Female, age 91, right hemisphere 57.8
Hippocampus, CA1
nTPM: 62.9
2749 Male, age 80, left hemisphere 76.7
1873 Female, age 85, both hemispheres 63.1
2527 Male, age 74, both hemispheres 60.1
2045 Male, age 76, both hemispheres 58.0
2082 Female, age 91, right hemisphere 56.8
Hippocampus, CA2
nTPM: 62.2
1892 Male, age 76, both hemispheres 70.7
1963 Male, age 80, left hemisphere 67.2
1940 Female, age 85, left hemisphere 60.6
2437 Female, age 94, left hemisphere 59.3
2249 Male, age 74, both hemispheres 58.8
2113 Female, age 91, right hemisphere 56.7
Hippocampus, CA3
nTPM: 62.6
2137 Male, age 80, left hemisphere 68.7
1867 Male, age 76, both hemispheres 65.5
2436 Male, age 74, both hemispheres 61.3
2861 Female, age 67, both hemispheres 61.0
1891 Female, age 85, both hemispheres 60.8
2620 Female, age 94, left hemisphere 58.4
Parahippocampal cortex
nTPM: 62.4
1850 Male, age 80, both hemispheres 68.9
2622 Female, age 67, right hemisphere 66.3
1990 Female, age 91, right hemisphere 66.1
2245 Female, age 91, both hemispheres 64.2
1933 Female, age 85, both hemispheres 62.4
2250 Female, age 67, right hemisphere 59.8
2532 Female, age 72, left hemisphere 59.3
2693 Female, age 94, both hemispheres 59.2
2692 Male, age 74, both hemispheres 58.9
2018 Male, age 76, both hemispheres 58.4
Perirhinal gyrus
nTPM: 67.8
1847 Female, age 91, left hemisphere 74.5
1794 Male, age 80, right hemisphere 68.3
1841 Female, age 85, right hemisphere 67.3
2521 Female, age 94, right hemisphere 67.1
2848 Male, age 76, right hemisphere 61.8
Subiculum
nTPM: 60.0
1901 Male, age 80, both hemispheres 66.0
1977 Female, age 85, both hemispheres 63.2
2438 Female, age 94, left hemisphere 60.4
2619 Male, age 74, both hemispheres 58.8
2042 Male, age 76, both hemispheres 57.5
2729 Female, age 91, right hemisphere 54.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 53.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 53.0
Samples: 197

Max nTPM: 92.8
Min nTPM: 25.9
Std nTPM: 15.4
Median nTPM: 50.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 92.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 91.0
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 90.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 90.0
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 86.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 86.7
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 85.0
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 84.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 84.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 81.9
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 81.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 62.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 62.6
FF:10153-102I9 76 years, female 64.6
FF:10169-103B7 60 years, female 60.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 20.7
Samples: 4

Max nTPM: 26.8
Min nTPM: 17.5
Sample A Female 26.8
Sample B Female 20.9
Sample C Male 17.5
Sample D Male 17.6
Entorhinal cortex
nTPM: 17.9
Samples: 4

Max nTPM: 20.0
Min nTPM: 15.1
Sample A Female 19.7
Sample B Female 20.0
Sample C Male 16.6
Sample D Male 15.1
Subiculum
nTPM: 17.2
Samples: 4

Max nTPM: 22.3
Min nTPM: 15.1
Sample A Female 22.3
Sample B Female 15.3
Sample C Male 16.0
Sample D Male 15.1
Ventral hippocampus
nTPM: 18.6
Samples: 4

Max nTPM: 21.9
Min nTPM: 13.4
Sample A Female 18.9
Sample B Female 13.4
Sample C Male 21.9
Sample D Male 20.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 98.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 98.2
Samples: 4

Max nTPM: 105.9
Min nTPM: 89.3
Sample A Male 89.3
Sample B Male 102.4
Sample C Female 95.0
Sample D Female 105.9
Hippocampal formation
nTPM: 97.1
Samples: 4

Max nTPM: 102.2
Min nTPM: 89.3
Sample A Male 100.1
Sample B Male 96.8
Sample C Female 102.2
Sample D Female 89.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
554 Antisense, RP_040304_01_03, Mouse strain C57BL/6J (56 days, male) 0.3
555 Antisense, RP_040304_01_03, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.