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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:21.0 nTPM
HPA:21.0 nTPM
GTEx:24.9 nTPM
FANTOM5:53.0 Scaled Tags Per Million
Pig:24.2 nTPM
Mouse:21.3 nTPM
Allen mouse:9.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029069
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.0
Sample id Sample description nTPM
Hippocampus
nTPM: 20.5
2621 Female, age 67, right hemisphere 27.4
2529 Female, age 94, left hemisphere 26.7
2148 Female, age 91, left hemisphere 24.8
1911 Female, age 85, right hemisphere 17.4
1855 Male, age 76, left hemisphere 16.4
1898 Male, age 80, left hemisphere 10.4
Dentate gyrus
nTPM: 18.6
2530 Female, age 94, left hemisphere 30.9
2531 Female, age 67, both hemispheres 25.7
2246 Female, age 85, both hemispheres 19.9
1927 Female, age 91, both hemispheres 15.8
2010 Male, age 76, both hemispheres 10.0
2528 Male, age 74, both hemispheres 9.3
Entorhinal gyrus
nTPM: 21.0
2686 Male, age 75, right hemisphere 33.5
2613 Female, age 94, left hemisphere 24.8
2117 Female, age 91, right hemisphere 20.0
1938 Female, age 85, left hemisphere 18.5
1787 Male, age 76, left hemisphere 14.6
2764 Male, age 80, right hemisphere 14.4
Hippocampus, CA1
nTPM: 13.2
2045 Male, age 76, both hemispheres 20.4
1873 Female, age 85, both hemispheres 17.5
2527 Male, age 74, both hemispheres 13.6
2082 Female, age 91, right hemisphere 8.4
2749 Male, age 80, left hemisphere 5.9
Hippocampus, CA2
nTPM: 12.7
2437 Female, age 94, left hemisphere 17.1
1963 Male, age 80, left hemisphere 16.0
2113 Female, age 91, right hemisphere 12.2
1940 Female, age 85, left hemisphere 11.8
1892 Male, age 76, both hemispheres 11.3
2249 Male, age 74, both hemispheres 7.8
Hippocampus, CA3
nTPM: 16.3
2861 Female, age 67, both hemispheres 27.1
2620 Female, age 94, left hemisphere 26.4
1891 Female, age 85, both hemispheres 18.9
1867 Male, age 76, both hemispheres 10.2
2137 Male, age 80, left hemisphere 10.2
2436 Male, age 74, both hemispheres 5.4
Parahippocampal cortex
nTPM: 17.3
2622 Female, age 67, right hemisphere 26.4
2692 Male, age 74, both hemispheres 25.7
2532 Female, age 72, left hemisphere 21.8
2245 Female, age 91, both hemispheres 19.9
1850 Male, age 80, both hemispheres 17.4
1990 Female, age 91, right hemisphere 13.8
2018 Male, age 76, both hemispheres 13.6
1933 Female, age 85, both hemispheres 13.3
2693 Female, age 94, both hemispheres 11.3
2250 Female, age 67, right hemisphere 9.7
Perirhinal gyrus
nTPM: 13.6
2848 Male, age 76, right hemisphere 22.8
1841 Female, age 85, right hemisphere 13.7
1794 Male, age 80, right hemisphere 13.1
1847 Female, age 91, left hemisphere 10.3
2521 Female, age 94, right hemisphere 8.0
Subiculum
nTPM: 18.7
2438 Female, age 94, left hemisphere 33.5
2619 Male, age 74, both hemispheres 20.2
2042 Male, age 76, both hemispheres 16.6
2729 Female, age 91, right hemisphere 14.9
1977 Female, age 85, both hemispheres 14.3
1901 Male, age 80, both hemispheres 12.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.9
Samples: 197

Max nTPM: 48.0
Min nTPM: 8.5
Std nTPM: 5.6
Median nTPM: 24.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 48.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 45.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 42.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 41.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 39.7
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 39.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 39.4
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 38.6
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 38.4
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 37.5
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 36.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 53.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.0
FF:10153-102I9 76 years, female 66.3
FF:10169-103B7 60 years, female 39.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 24.2
Samples: 4

Max nTPM: 26.2
Min nTPM: 22.7
Sample A Female 23.4
Sample B Female 24.3
Sample C Male 26.2
Sample D Male 22.7
Entorhinal cortex
nTPM: 22.4
Samples: 4

Max nTPM: 25.0
Min nTPM: 20.6
Sample A Female 25.0
Sample B Female 20.6
Sample C Male 21.5
Sample D Male 22.6
Subiculum
nTPM: 24.1
Samples: 4

Max nTPM: 28.2
Min nTPM: 22.2
Sample A Female 28.2
Sample B Female 22.3
Sample C Male 23.8
Sample D Male 22.2
Ventral hippocampus
nTPM: 23.5
Samples: 4

Max nTPM: 26.4
Min nTPM: 21.6
Sample A Female 21.6
Sample B Female 22.0
Sample C Male 24.1
Sample D Male 26.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.3
Samples: 4

Max nTPM: 22.8
Min nTPM: 19.5
Sample A Male 22.3
Sample B Male 20.6
Sample C Female 19.5
Sample D Female 22.8
Hippocampal formation
nTPM: 20.2
Samples: 4

Max nTPM: 25.7
Min nTPM: 15.8
Sample A Male 15.8
Sample B Male 25.7
Sample C Female 22.2
Sample D Female 17.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.5
68844701 Antisense, RP_050222_02_C03, Mouse strain C57BL/6J (56 days, male) 9.5

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