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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:260.8 nTPM
HPA:260.8 nTPM
GTEx:216.9 nTPM
FANTOM5:205.9 Scaled Tags Per Million
Pig:42.7 nTPM
Mouse:401.1 nTPM
Allen mouse:7.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 260.8
Sample id Sample description nTPM
Hippocampus
nTPM: 230.3
1911 Female, age 85, right hemisphere 250.9
2529 Female, age 94, left hemisphere 243.5
1898 Male, age 80, left hemisphere 228.8
2621 Female, age 67, right hemisphere 223.5
1855 Male, age 76, left hemisphere 221.0
2148 Female, age 91, left hemisphere 213.8
Dentate gyrus
nTPM: 223.1
2530 Female, age 94, left hemisphere 240.8
2010 Male, age 76, both hemispheres 235.7
2528 Male, age 74, both hemispheres 229.0
2246 Female, age 85, both hemispheres 223.5
2531 Female, age 67, both hemispheres 206.8
1927 Female, age 91, both hemispheres 202.6
Entorhinal gyrus
nTPM: 239.3
2117 Female, age 91, right hemisphere 289.6
2764 Male, age 80, right hemisphere 258.7
1938 Female, age 85, left hemisphere 231.0
2686 Male, age 75, right hemisphere 221.3
1787 Male, age 76, left hemisphere 219.1
2613 Female, age 94, left hemisphere 216.0
Hippocampus, CA1
nTPM: 218.0
2527 Male, age 74, both hemispheres 237.7
2082 Female, age 91, right hemisphere 228.9
1873 Female, age 85, both hemispheres 221.3
2749 Male, age 80, left hemisphere 212.0
2045 Male, age 76, both hemispheres 190.2
Hippocampus, CA2
nTPM: 230.1
2249 Male, age 74, both hemispheres 254.9
1963 Male, age 80, left hemisphere 242.6
2113 Female, age 91, right hemisphere 230.7
2437 Female, age 94, left hemisphere 227.3
1940 Female, age 85, left hemisphere 224.3
1892 Male, age 76, both hemispheres 200.6
Hippocampus, CA3
nTPM: 214.2
1891 Female, age 85, both hemispheres 263.5
2436 Male, age 74, both hemispheres 217.6
1867 Male, age 76, both hemispheres 214.2
2137 Male, age 80, left hemisphere 197.1
2620 Female, age 94, left hemisphere 197.0
2861 Female, age 67, both hemispheres 195.7
Parahippocampal cortex
nTPM: 224.7
2692 Male, age 74, both hemispheres 250.2
1990 Female, age 91, right hemisphere 239.5
2532 Female, age 72, left hemisphere 234.8
1933 Female, age 85, both hemispheres 229.5
1850 Male, age 80, both hemispheres 225.3
2018 Male, age 76, both hemispheres 220.8
2245 Female, age 91, both hemispheres 220.4
2693 Female, age 94, both hemispheres 212.8
2250 Female, age 67, right hemisphere 209.1
2622 Female, age 67, right hemisphere 204.4
Perirhinal gyrus
nTPM: 207.5
2521 Female, age 94, right hemisphere 211.1
1794 Male, age 80, right hemisphere 209.3
2848 Male, age 76, right hemisphere 208.7
1847 Female, age 91, left hemisphere 206.0
1841 Female, age 85, right hemisphere 202.2
Subiculum
nTPM: 260.8
2042 Male, age 76, both hemispheres 303.5
1901 Male, age 80, both hemispheres 280.5
1977 Female, age 85, both hemispheres 262.3
2438 Female, age 94, left hemisphere 249.9
2619 Male, age 74, both hemispheres 241.7
2729 Female, age 91, right hemisphere 227.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 216.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 216.9
Samples: 197

Max nTPM: 710.9
Min nTPM: 27.8
Std nTPM: 123.2
Median nTPM: 190.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 710.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 689.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 622.8
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 600.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 520.5
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 500.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 474.8
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 472.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 459.8
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 457.1
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 451.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 205.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 205.9
FF:10153-102I9 76 years, female 242.4
FF:10169-103B7 60 years, female 169.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 42.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 42.7
Samples: 4

Max nTPM: 73.1
Min nTPM: 12.0
Sample A Female 56.4
Sample B Female 29.2
Sample C Male 73.1
Sample D Male 12.0
Entorhinal cortex
nTPM: 10.2
Samples: 4

Max nTPM: 16.9
Min nTPM: 4.9
Sample A Female 4.9
Sample B Female 16.9
Sample C Male 6.7
Sample D Male 12.4
Subiculum
nTPM: 11.7
Samples: 4

Max nTPM: 15.8
Min nTPM: 6.2
Sample A Female 9.7
Sample B Female 15.8
Sample C Male 6.2
Sample D Male 15.0
Ventral hippocampus
nTPM: 22.6
Samples: 4

Max nTPM: 37.5
Min nTPM: 8.4
Sample A Female 25.6
Sample B Female 8.4
Sample C Male 18.7
Sample D Male 37.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 401.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 169.1
Samples: 4

Max nTPM: 234.1
Min nTPM: 73.2
Sample A Male 234.1
Sample B Male 168.6
Sample C Female 200.3
Sample D Female 73.2
Hippocampal formation
nTPM: 401.1
Samples: 4

Max nTPM: 639.8
Min nTPM: 259.2
Sample A Male 259.2
Sample B Male 302.4
Sample C Female 639.8
Sample D Female 403.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.8
386243 Antisense, RP_040804_01_D04, Mouse strain C57BL/6J (56 days, male) 7.8

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The Human Protein Atlas

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