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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:72.1 nTPM
HPA:72.1 nTPM
GTEx:96.6 nTPM
FANTOM5:177.1 Scaled Tags Per Million
Mouse:81.2 nTPM
Allen mouse:18.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB004222Antibody CAB005126Antibody CAB018597
Glial cells MediumNot detectedLow
Neuronal cells HighMediumMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 72.1
Sample id Sample description nTPM
Hippocampus
nTPM: 66.6
1898 Male, age 80, left hemisphere 77.4
1855 Male, age 76, left hemisphere 71.4
2621 Female, age 67, right hemisphere 68.4
2529 Female, age 94, left hemisphere 62.0
1911 Female, age 85, right hemisphere 61.8
2148 Female, age 91, left hemisphere 58.8
Dentate gyrus
nTPM: 66.7
2010 Male, age 76, both hemispheres 78.5
1927 Female, age 91, both hemispheres 70.9
2530 Female, age 94, left hemisphere 66.1
2246 Female, age 85, both hemispheres 64.0
2528 Male, age 74, both hemispheres 62.0
2531 Female, age 67, both hemispheres 58.5
Entorhinal gyrus
nTPM: 60.9
1938 Female, age 85, left hemisphere 65.0
1787 Male, age 76, left hemisphere 64.0
2764 Male, age 80, right hemisphere 61.5
2686 Male, age 75, right hemisphere 61.2
2117 Female, age 91, right hemisphere 58.7
2613 Female, age 94, left hemisphere 54.9
Hippocampus, CA1
nTPM: 72.1
2749 Male, age 80, left hemisphere 89.5
2045 Male, age 76, both hemispheres 75.1
1873 Female, age 85, both hemispheres 71.3
2527 Male, age 74, both hemispheres 69.8
2082 Female, age 91, right hemisphere 54.6
Hippocampus, CA2
nTPM: 70.9
1892 Male, age 76, both hemispheres 99.6
1963 Male, age 80, left hemisphere 75.7
2249 Male, age 74, both hemispheres 70.7
2437 Female, age 94, left hemisphere 62.0
1940 Female, age 85, left hemisphere 61.7
2113 Female, age 91, right hemisphere 55.9
Hippocampus, CA3
nTPM: 69.1
1867 Male, age 76, both hemispheres 85.0
2137 Male, age 80, left hemisphere 80.6
2436 Male, age 74, both hemispheres 75.4
1891 Female, age 85, both hemispheres 65.6
2620 Female, age 94, left hemisphere 54.2
2861 Female, age 67, both hemispheres 53.6
Parahippocampal cortex
nTPM: 66.5
2250 Female, age 67, right hemisphere 74.4
1850 Male, age 80, both hemispheres 73.9
2245 Female, age 91, both hemispheres 73.7
1933 Female, age 85, both hemispheres 67.2
2018 Male, age 76, both hemispheres 66.9
1990 Female, age 91, right hemisphere 65.9
2693 Female, age 94, both hemispheres 63.3
2532 Female, age 72, left hemisphere 62.9
2622 Female, age 67, right hemisphere 59.5
2692 Male, age 74, both hemispheres 56.7
Perirhinal gyrus
nTPM: 72.1
1841 Female, age 85, right hemisphere 74.6
1794 Male, age 80, right hemisphere 72.5
1847 Female, age 91, left hemisphere 71.9
2521 Female, age 94, right hemisphere 71.4
2848 Male, age 76, right hemisphere 69.9
Subiculum
nTPM: 63.7
1901 Male, age 80, both hemispheres 71.9
1977 Female, age 85, both hemispheres 67.4
2438 Female, age 94, left hemisphere 65.8
2042 Male, age 76, both hemispheres 63.3
2619 Male, age 74, both hemispheres 57.1
2729 Female, age 91, right hemisphere 56.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 96.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 96.6
Samples: 197

Max nTPM: 263.2
Min nTPM: 45.3
Std nTPM: 38.8
Median nTPM: 86.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 263.2
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 218.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 209.7
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 204.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 192.2
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 187.5
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 172.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 170.1
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 167.8
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 167.6
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 166.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 177.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 177.1
FF:10169-103B7 60 years, female 214.5
FF:10153-102I9 76 years, female 139.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 81.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 78.7
Samples: 4

Max nTPM: 82.1
Min nTPM: 74.4
Sample A Male 74.4
Sample B Male 81.2
Sample C Female 82.1
Sample D Female 77.2
Hippocampal formation
nTPM: 81.2
Samples: 4

Max nTPM: 91.0
Min nTPM: 75.3
Sample A Male 91.0
Sample B Male 75.3
Sample C Female 82.2
Sample D Female 76.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 18.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 18.0
68546299 Antisense, RP_050120_02_C10, Mouse strain C57BL/6J (56 days, male) 18.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.