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CHCHD1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:38.9 nTPM
HPA:38.9 nTPM
GTEx:30.5 nTPM
FANTOM5:38.9 Scaled Tags Per Million
Pig:9.2 nTPM
Mouse:86.8 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039046
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 38.9
Sample id Sample description nTPM
Hippocampus
nTPM: 38.7
1898 Male, age 80, left hemisphere 40.1
2148 Female, age 91, left hemisphere 39.0
1855 Male, age 76, left hemisphere 38.6
2529 Female, age 94, left hemisphere 38.6
1911 Female, age 85, right hemisphere 38.2
2621 Female, age 67, right hemisphere 37.7
Dentate gyrus
nTPM: 38.3
2010 Male, age 76, both hemispheres 38.7
2246 Female, age 85, both hemispheres 38.7
2528 Male, age 74, both hemispheres 38.7
1927 Female, age 91, both hemispheres 38.6
2530 Female, age 94, left hemisphere 37.9
2531 Female, age 67, both hemispheres 37.2
Entorhinal gyrus
nTPM: 38.0
1938 Female, age 85, left hemisphere 39.0
2764 Male, age 80, right hemisphere 38.6
1787 Male, age 76, left hemisphere 38.4
2117 Female, age 91, right hemisphere 38.3
2613 Female, age 94, left hemisphere 37.2
2686 Male, age 75, right hemisphere 36.8
Hippocampus, CA1
nTPM: 38.6
2749 Male, age 80, left hemisphere 39.7
1873 Female, age 85, both hemispheres 39.1
2527 Male, age 74, both hemispheres 38.7
2045 Male, age 76, both hemispheres 37.9
2082 Female, age 91, right hemisphere 37.5
Hippocampus, CA2
nTPM: 38.7
1892 Male, age 76, both hemispheres 39.7
1963 Male, age 80, left hemisphere 39.1
1940 Female, age 85, left hemisphere 38.9
2249 Male, age 74, both hemispheres 38.4
2113 Female, age 91, right hemisphere 38.3
2437 Female, age 94, left hemisphere 38.0
Hippocampus, CA3
nTPM: 38.5
1867 Male, age 76, both hemispheres 39.6
2137 Male, age 80, left hemisphere 39.3
2436 Male, age 74, both hemispheres 38.6
1891 Female, age 85, both hemispheres 38.4
2620 Female, age 94, left hemisphere 38.0
2861 Female, age 67, both hemispheres 37.3
Parahippocampal cortex
nTPM: 38.2
1850 Male, age 80, both hemispheres 39.4
2245 Female, age 91, both hemispheres 39.4
1990 Female, age 91, right hemisphere 38.9
2250 Female, age 67, right hemisphere 38.3
1933 Female, age 85, both hemispheres 38.2
2018 Male, age 76, both hemispheres 37.8
2692 Male, age 74, both hemispheres 37.8
2693 Female, age 94, both hemispheres 37.8
2532 Female, age 72, left hemisphere 37.6
2622 Female, age 67, right hemisphere 37.1
Perirhinal gyrus
nTPM: 38.9
1841 Female, age 85, right hemisphere 39.8
1847 Female, age 91, left hemisphere 39.5
1794 Male, age 80, right hemisphere 38.9
2521 Female, age 94, right hemisphere 38.0
2848 Male, age 76, right hemisphere 38.0
Subiculum
nTPM: 38.0
2729 Female, age 91, right hemisphere 38.6
1901 Male, age 80, both hemispheres 38.4
1977 Female, age 85, both hemispheres 38.3
2042 Male, age 76, both hemispheres 37.8
2438 Female, age 94, left hemisphere 37.6
2619 Male, age 74, both hemispheres 37.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.5
Samples: 197

Max nTPM: 91.2
Min nTPM: 13.4
Std nTPM: 8.3
Median nTPM: 29.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 91.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 59.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 51.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 50.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 50.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 49.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 47.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 46.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 46.3
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 46.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 43.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 38.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 38.9
FF:10169-103B7 60 years, female 47.0
FF:10153-102I9 76 years, female 30.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.6
Samples: 4

Max nTPM: 9.2
Min nTPM: 8.2
Sample A Female 9.2
Sample B Female 8.5
Sample C Male 8.2
Sample D Male 8.5
Entorhinal cortex
nTPM: 9.2
Samples: 4

Max nTPM: 9.6
Min nTPM: 8.7
Sample A Female 9.4
Sample B Female 9.6
Sample C Male 8.7
Sample D Male 9.0
Subiculum
nTPM: 9.1
Samples: 4

Max nTPM: 9.6
Min nTPM: 8.4
Sample A Female 9.6
Sample B Female 9.5
Sample C Male 9.0
Sample D Male 8.4
Ventral hippocampus
nTPM: 8.0
Samples: 4

Max nTPM: 8.2
Min nTPM: 7.7
Sample A Female 8.2
Sample B Female 8.0
Sample C Male 8.2
Sample D Male 7.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 86.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 81.0
Samples: 4

Max nTPM: 88.4
Min nTPM: 70.9
Sample A Male 83.2
Sample B Male 88.4
Sample C Female 81.6
Sample D Female 70.9
Hippocampal formation
nTPM: 86.8
Samples: 4

Max nTPM: 91.1
Min nTPM: 78.6
Sample A Male 91.1
Sample B Male 78.6
Sample C Female 87.5
Sample D Female 90.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
68862162 Antisense, RP_050301_01_F07, Mouse strain C57BL/6J (56 days, male) 0.3

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