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PRPF8
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:84.4 nTPM
HPA:84.4 nTPM
GTEx:67.9 nTPM
FANTOM5:52.5 Scaled Tags Per Million
Pig:45.0 nTPM
Mouse:60.7 nTPM
Allen mouse:5.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB009941Antibody CAB015457
Glial cells MediumNot detected
Neuronal cells MediumLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 84.4
Sample id Sample description nTPM
Hippocampus
nTPM: 77.1
2529 Female, age 94, left hemisphere 81.1
1898 Male, age 80, left hemisphere 78.3
2621 Female, age 67, right hemisphere 78.1
2148 Female, age 91, left hemisphere 78.0
1855 Male, age 76, left hemisphere 73.7
1911 Female, age 85, right hemisphere 73.5
Dentate gyrus
nTPM: 77.3
1927 Female, age 91, both hemispheres 79.3
2010 Male, age 76, both hemispheres 77.9
2531 Female, age 67, both hemispheres 77.5
2246 Female, age 85, both hemispheres 76.7
2528 Male, age 74, both hemispheres 76.2
2530 Female, age 94, left hemisphere 76.1
Entorhinal gyrus
nTPM: 79.4
2764 Male, age 80, right hemisphere 86.4
1938 Female, age 85, left hemisphere 83.0
1787 Male, age 76, left hemisphere 79.9
2117 Female, age 91, right hemisphere 78.7
2613 Female, age 94, left hemisphere 75.7
2686 Male, age 75, right hemisphere 73.0
Hippocampus, CA1
nTPM: 78.7
2749 Male, age 80, left hemisphere 85.7
2527 Male, age 74, both hemispheres 79.8
1873 Female, age 85, both hemispheres 76.6
2082 Female, age 91, right hemisphere 76.6
2045 Male, age 76, both hemispheres 74.9
Hippocampus, CA2
nTPM: 79.4
2437 Female, age 94, left hemisphere 82.5
1963 Male, age 80, left hemisphere 80.9
1892 Male, age 76, both hemispheres 78.8
2249 Male, age 74, both hemispheres 78.2
1940 Female, age 85, left hemisphere 78.0
2113 Female, age 91, right hemisphere 77.9
Hippocampus, CA3
nTPM: 78.5
2436 Male, age 74, both hemispheres 84.8
2137 Male, age 80, left hemisphere 81.2
2620 Female, age 94, left hemisphere 77.7
1891 Female, age 85, both hemispheres 76.9
1867 Male, age 76, both hemispheres 76.1
2861 Female, age 67, both hemispheres 74.2
Parahippocampal cortex
nTPM: 80.0
1850 Male, age 80, both hemispheres 88.9
2532 Female, age 72, left hemisphere 83.7
1990 Female, age 91, right hemisphere 79.8
2692 Male, age 74, both hemispheres 79.8
2250 Female, age 67, right hemisphere 79.7
2693 Female, age 94, both hemispheres 78.9
2245 Female, age 91, both hemispheres 78.3
1933 Female, age 85, both hemispheres 77.6
2018 Male, age 76, both hemispheres 76.9
2622 Female, age 67, right hemisphere 76.4
Perirhinal gyrus
nTPM: 84.4
1794 Male, age 80, right hemisphere 86.1
1841 Female, age 85, right hemisphere 85.0
2848 Male, age 76, right hemisphere 84.3
2521 Female, age 94, right hemisphere 83.5
1847 Female, age 91, left hemisphere 83.2
Subiculum
nTPM: 80.2
2438 Female, age 94, left hemisphere 85.5
2619 Male, age 74, both hemispheres 82.7
1977 Female, age 85, both hemispheres 81.3
1901 Male, age 80, both hemispheres 79.1
2042 Male, age 76, both hemispheres 77.0
2729 Female, age 91, right hemisphere 75.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 67.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 67.9
Samples: 197

Max nTPM: 124.2
Min nTPM: 32.1
Std nTPM: 15.0
Median nTPM: 66.8
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 124.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 107.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 105.9
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 103.3
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 100.2
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 97.2
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 96.8
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 96.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 94.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 94.4
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 92.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 52.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 52.5
FF:10153-102I9 76 years, female 69.5
FF:10169-103B7 60 years, female 35.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 45.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 43.6
Samples: 4

Max nTPM: 51.7
Min nTPM: 32.8
Sample A Female 51.7
Sample B Female 45.7
Sample C Male 44.3
Sample D Male 32.8
Entorhinal cortex
nTPM: 41.2
Samples: 4

Max nTPM: 49.7
Min nTPM: 34.8
Sample A Female 49.7
Sample B Female 40.5
Sample C Male 39.8
Sample D Male 34.8
Subiculum
nTPM: 44.0
Samples: 4

Max nTPM: 57.0
Min nTPM: 37.0
Sample A Female 57.0
Sample B Female 39.3
Sample C Male 42.6
Sample D Male 37.0
Ventral hippocampus
nTPM: 45.1
Samples: 4

Max nTPM: 58.9
Min nTPM: 32.2
Sample A Female 43.6
Sample B Female 32.2
Sample C Male 58.9
Sample D Male 45.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 60.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 60.7
Samples: 4

Max nTPM: 73.9
Min nTPM: 52.7
Sample A Male 59.0
Sample B Male 52.7
Sample C Female 57.2
Sample D Female 73.9
Hippocampal formation
nTPM: 57.2
Samples: 4

Max nTPM: 69.8
Min nTPM: 45.4
Sample A Male 45.4
Sample B Male 62.5
Sample C Female 69.8
Sample D Female 51.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.4
68667270 Antisense, RP_050201_01_H11, Mouse strain C57BL/6J (56 days, male) 5.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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