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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:8.0 nTPM
HPA:8.0 nTPM
GTEx:8.3 nTPM
FANTOM5:9.7 Scaled Tags Per Million
Pig:7.5 nTPM
Mouse:8.8 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB018365
Glial cells Not detected
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 8.0
Sample id Sample description nTPM
Hippocampus
nTPM: 5.4
2148 Female, age 91, left hemisphere 9.5
1911 Female, age 85, right hemisphere 5.8
2621 Female, age 67, right hemisphere 5.2
1855 Male, age 76, left hemisphere 4.5
1898 Male, age 80, left hemisphere 4.1
2529 Female, age 94, left hemisphere 3.5
Dentate gyrus
nTPM: 6.6
2531 Female, age 67, both hemispheres 8.9
1927 Female, age 91, both hemispheres 8.7
2528 Male, age 74, both hemispheres 6.5
2010 Male, age 76, both hemispheres 6.1
2246 Female, age 85, both hemispheres 5.7
2530 Female, age 94, left hemisphere 3.3
Entorhinal gyrus
nTPM: 8.0
2613 Female, age 94, left hemisphere 11.9
2764 Male, age 80, right hemisphere 10.2
2686 Male, age 75, right hemisphere 8.2
1938 Female, age 85, left hemisphere 7.8
1787 Male, age 76, left hemisphere 7.3
2117 Female, age 91, right hemisphere 2.8
Hippocampus, CA1
nTPM: 6.4
2045 Male, age 76, both hemispheres 9.1
2082 Female, age 91, right hemisphere 7.4
2749 Male, age 80, left hemisphere 6.1
2527 Male, age 74, both hemispheres 5.7
1873 Female, age 85, both hemispheres 3.6
Hippocampus, CA2
nTPM: 4.4
2113 Female, age 91, right hemisphere 6.6
1892 Male, age 76, both hemispheres 4.4
2437 Female, age 94, left hemisphere 4.4
1963 Male, age 80, left hemisphere 4.2
1940 Female, age 85, left hemisphere 3.9
2249 Male, age 74, both hemispheres 3.2
Hippocampus, CA3
nTPM: 5.8
2861 Female, age 67, both hemispheres 9.0
2436 Male, age 74, both hemispheres 7.2
2620 Female, age 94, left hemisphere 6.9
1867 Male, age 76, both hemispheres 4.8
2137 Male, age 80, left hemisphere 3.9
1891 Female, age 85, both hemispheres 3.2
Parahippocampal cortex
nTPM: 7.3
2622 Female, age 67, right hemisphere 10.5
2693 Female, age 94, both hemispheres 9.5
1990 Female, age 91, right hemisphere 8.0
1850 Male, age 80, both hemispheres 7.8
2692 Male, age 74, both hemispheres 7.6
1933 Female, age 85, both hemispheres 7.5
2018 Male, age 76, both hemispheres 6.6
2532 Female, age 72, left hemisphere 6.0
2250 Female, age 67, right hemisphere 5.6
2245 Female, age 91, both hemispheres 4.5
Perirhinal gyrus
nTPM: 7.5
1847 Female, age 91, left hemisphere 10.9
1794 Male, age 80, right hemisphere 7.8
2848 Male, age 76, right hemisphere 7.3
2521 Female, age 94, right hemisphere 5.7
1841 Female, age 85, right hemisphere 5.5
Subiculum
nTPM: 4.4
2729 Female, age 91, right hemisphere 7.6
1977 Female, age 85, both hemispheres 5.3
2438 Female, age 94, left hemisphere 4.2
2619 Male, age 74, both hemispheres 4.2
1901 Male, age 80, both hemispheres 2.6
2042 Male, age 76, both hemispheres 2.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 8.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.3
Samples: 197

Max nTPM: 19.8
Min nTPM: 1.1
Std nTPM: 3.3
Median nTPM: 8.2
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 19.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 18.3
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 18.2
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 17.2
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 15.8
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 15.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 15.2
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 14.8
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 14.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 14.5
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 14.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 9.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 9.7
FF:10153-102I9 76 years, female 11.1
FF:10169-103B7 60 years, female 8.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 5.4
Samples: 4

Max nTPM: 5.9
Min nTPM: 4.6
Sample A Female 5.9
Sample B Female 5.9
Sample C Male 5.1
Sample D Male 4.6
Entorhinal cortex
nTPM: 7.5
Samples: 4

Max nTPM: 8.1
Min nTPM: 6.9
Sample A Female 7.9
Sample B Female 6.9
Sample C Male 8.1
Sample D Male 7.0
Subiculum
nTPM: 7.1
Samples: 4

Max nTPM: 8.2
Min nTPM: 6.4
Sample A Female 8.2
Sample B Female 6.5
Sample C Male 7.2
Sample D Male 6.4
Ventral hippocampus
nTPM: 6.7
Samples: 4

Max nTPM: 9.1
Min nTPM: 5.2
Sample A Female 6.3
Sample B Female 5.2
Sample C Male 9.1
Sample D Male 6.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 8.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.8
Samples: 4

Max nTPM: 10.5
Min nTPM: 7.1
Sample A Male 7.4
Sample B Male 10.5
Sample C Female 7.1
Sample D Female 10.2
Hippocampal formation
nTPM: 7.5
Samples: 4

Max nTPM: 8.5
Min nTPM: 6.5
Sample A Male 6.6
Sample B Male 8.4
Sample C Female 6.5
Sample D Female 8.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
82 Antisense, RP_Baylor_102622, Mouse strain C57BL/6J (56 days, male) 1.1
81 Antisense, RP_Baylor_102622, Mouse strain C57BL/6J (56 days, male) 0.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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