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ZHX3
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:32.8 nTPM
HPA:32.8 nTPM
GTEx:26.5 nTPM
FANTOM5:89.0 Scaled Tags Per Million
Pig:17.4 nTPM
Mouse:14.5 nTPM
Allen mouse:0.0 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 32.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 29.6
2481 Female, age 94, left hemisphere 41.9
2289 Male, age 61, right hemisphere 35.6
1857 Female, age 85, left hemisphere 29.2
2288 Male, age 75, left hemisphere 28.7
2290 Female, age 72, unknown 28.0
1854 Male, age 80, left hemisphere 27.1
1781 Male, age 74, unknown 23.3
2846 Female, age 79, unknown 22.8
Claustrum
nTPM: 24.6
2568 Male, age 61, both hemispheres 27.3
2491 Male, age 75, both hemispheres 26.5
2196 Female, age 79, unknown 26.3
2198 Male, age 80, both hemispheres 26.2
2284 Female, age 91, both hemispheres 26.1
1956 Male, age 74, unknown 24.5
2645 Female, age 72, unknown 24.5
2292 Female, age 85, both hemispheres 20.3
2392 Female, age 94, both hemispheres 20.2
Globus pallidus, externus
nTPM: 32.8
2646 Male, age 61, right hemisphere 45.3
2567 Female, age 72, unknown 36.1
1996 Male, age 80, right hemisphere 31.9
2772 Female, age 79, unknown 27.4
2395 Male, age 75, both hemispheres 23.5
Globus pallidus, internus
nTPM: 31.8
2483 Female, age 94, right hemisphere 41.6
2566 Female, age 72, unknown 33.9
1818 Male, age 74, unknown 32.6
2111 Female, age 85, right hemisphere 31.4
2287 Male, age 75, right hemisphere 27.9
2037 Male, age 80, right hemisphere 27.8
2778 Female, age 91, both hemispheres 27.5
Nucleus accumbens
nTPM: 27.4
2824 Male, age 61, right hemisphere 30.4
1856 Female, age 91, right hemisphere 29.8
2286 Male, age 75, left hemisphere 28.6
2698 Female, age 72, unknown 27.8
2391 Female, age 94, left hemisphere 26.4
1783 Male, age 74, unknown 25.9
1806 Female, age 85, left hemisphere 25.5
2732 Male, age 80, right hemisphere 25.1
Nucleus basalis of Meynert
nTPM: 30.1
2569 Male, age 61, both hemispheres 48.7
2393 Male, age 80, right hemisphere 27.8
2484 Female, age 94, left hemisphere 26.0
2821 Male, age 75, both hemispheres 18.0
Nucleus of the diagonal band
nTPM: 23.5
1979 Male, age 74, unknown 30.5
2195 Female, age 85, both hemispheres 24.7
2775 Male, age 80, right hemisphere 23.8
1812 Female, age 91, both hemispheres 21.0
2029 Male, age 61, right hemisphere 17.5
Olfactory tubercle
nTPM: 27.3
1846 Male, age 80, right hemisphere 31.0
2487 Female, age 94, left hemisphere 27.5
2856 Male, age 75, right hemisphere 27.5
1998 Female, age 91, both hemispheres 23.0
Putamen
nTPM: 31.1
2647 Male, age 75, left hemisphere 38.3
2489 Female, age 72, unknown 36.1
2482 Female, age 94, left hemisphere 36.0
1829 Male, age 74, unknown 29.4
1838 Male, age 80, right hemisphere 27.7
1937 Female, age 91, right hemisphere 25.6
2466 Female, age 79, unknown 24.7
Septal nuclei
nTPM: 25.6
2199 Male, age 80, right hemisphere 35.7
2059 Female, age 85, both hemispheres 30.0
2629 Female, age 94, right hemisphere 27.2
1960 Male, age 74, unknown 23.6
2394 Male, age 61, left hemisphere 22.2
2009 Female, age 91, both hemispheres 21.6
2031 Female, age 72, unknown 19.0

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 26.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 26.5
Samples: 246

Max nTPM: 49.8
Min nTPM: 14.2
Std nTPM: 5.9
Median nTPM: 25.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 49.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 48.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 46.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 42.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 40.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 40.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 40.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 39.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 38.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 38.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 37.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 25.4
Samples: 246

Max nTPM: 43.3
Min nTPM: 12.0
Std nTPM: 5.6
Median nTPM: 25.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 43.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 43.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 43.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 41.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 39.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 39.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 38.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 38.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 37.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 36.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 36.3
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Brain - Putamen (basal ganglia)
Average nTPM: 24.6
Samples: 205

Max nTPM: 41.3
Min nTPM: 12.2
Std nTPM: 5.2
Median nTPM: 23.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 41.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 39.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 38.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 38.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 38.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 38.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 37.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 36.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 36.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 34.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 34.8
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 89.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 89.0
FF:10164-103B2 76 years, female 89.0
Globus pallidus
Scaled Tags Per Million: 59.2
FF:10161-103A8 76 years, female 60.1
FF:10175-103C4 60 years, female 58.4
Nucleus accumbens
Scaled Tags Per Million: 65.2
FF:10037-101F1 23-56 years, mixed 65.2
Putamen
Scaled Tags Per Million: 77.8
FF:10176-103C5 60 years, female 77.8

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 17.4
Pig sample Sample description nTPM
Caudate
nTPM: 17.4
Samples: 4

Max nTPM: 20.2
Min nTPM: 14.2
Sample A Female 14.2
Sample B Female 20.2
Sample C Male 19.8
Sample D Male 15.5
Putamen
nTPM: 14.1
Samples: 4

Max nTPM: 14.8
Min nTPM: 13.3
Sample A Female 13.3
Sample B Female 14.0
Sample C Male 14.4
Sample D Male 14.8
Septum
nTPM: 15.6
Samples: 4

Max nTPM: 17.1
Min nTPM: 14.2
Sample A Female 14.8
Sample B Female 17.1
Sample C Male 16.2
Sample D Male 14.2
Ventral pallidum
nTPM: 14.8
Samples: 4

Max nTPM: 17.4
Min nTPM: 13.4
Sample A Female 13.4
Sample B Female 14.5
Sample C Male 17.4
Sample D Male 13.9

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 14.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 14.6
Samples: 4

Max nTPM: 15.6
Min nTPM: 13.3
Sample A Male 13.3
Sample B Male 13.8
Sample C Female 15.5
Sample D Female 15.6
Septum
nTPM: 13.3
Samples: 4

Max nTPM: 15.8
Min nTPM: 11.8
Sample A Male 13.2
Sample B Male 11.8
Sample C Female 12.5
Sample D Female 15.8
Ventral forebrain
nTPM: 13.5
Samples: 4

Max nTPM: 15.2
Min nTPM: 12.1
Sample A Male 12.1
Sample B Male 13.9
Sample C Female 12.8
Sample D Female 15.2

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.0
68918982 Antisense, RP_050301_02_C10, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.0
68918982 Antisense, RP_050301_02_C10, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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