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ZHX3
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:32.1 nTPM
HPA:32.1 nTPM
GTEx:21.2 nTPM
FANTOM5:51.2 Scaled Tags Per Million
Pig:17.4 nTPM
Mouse:13.5 nTPM
Allen mouse:0.0 Expression energy

MIDBRAIN - Annotated protein expression
Pending normal tissue analysis

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 32.1
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 29.6
2586 Male, age 75, left hemisphere 46.0
2828 Female, age 72, unknown 36.1
2219 Male, age 76, both hemispheres 30.6
1827 Male, age 72, unknown 28.6
1870 Female, age 42, unknown 27.9
1830 Male, age 51, unknown 26.8
1833 Male, age 53, unknown 26.7
2411 Female, age 72, unknown 25.3
2666 Male, age 74, left hemisphere 24.3
2019 Male, age 18, unknown 23.2
Dorsal raphe nucleus
nTPM: 26.3
2016 Female, age 72, unknown 33.3
1828 Male, age 53, unknown 30.0
2047 Male, age 72, unknown 28.6
2298 Female, age 72, unknown 21.1
2750 Male, age 76, both hemispheres 18.6
Inferior colliculus
nTPM: 29.9
2849 Male, age 72, unknown 33.3
1848 Female, age 42, unknown 32.2
1890 Male, age 53, unknown 28.7
2097 Female, age 72, unknown 25.3
Median raphe nucleus
nTPM: 18.4
2220 Male, age 76, midline 18.4
Pedunculopontine tegmental nucleus
nTPM: 20.4
1921 Female, age 85, both hemispheres 23.3
2334 Male, age 80, both hemispheres 20.7
2338 Male, age 61, both hemispheres 17.1
Periaquaductal grey, anterior
nTPM: 31.2
2502 Female, age 75, unknown 35.4
1795 Male, age 51, unknown 30.6
1947 Male, age 18, unknown 27.6
Periaquaductal grey, dorsal
nTPM: 30.6
1840 Male, age 53, unknown 36.0
2464 Female, age 72, unknown 30.8
2850 Male, age 76, both hemispheres 29.2
1831 Male, age 72, unknown 26.6
Periaquaductal grey, lateral
nTPM: 32.1
2140 Male, age 76, both hemispheres 35.3
2053 Male, age 18, unknown 34.9
2272 Male, age 74, both hemispheres 26.2
Pretectal area
nTPM: 28.8
2407 Male, age 75, both hemispheres 33.8
1944 Female, age 72, unknown 31.6
2667 Female, age 75, unknown 30.3
2273 Male, age 74, both hemispheres 29.9
2825 Male, age 18, unknown 29.4
1815 Male, age 53, unknown 29.0
1816 Male, age 51, unknown 28.9
1817 Female, age 42, unknown 28.1
2224 Female, age 72, unknown 26.6
2007 Male, age 72, unknown 25.2
2316 Male, age 76, right hemisphere 24.0
Red nucleus
nTPM: 27.3
2588 Male, age 74, left hemisphere 31.8
2769 Male, age 72, unknown 30.4
2503 Female, age 72, unknown 29.6
2227 Male, age 72, unknown 29.1
1865 Male, age 51, unknown 28.7
1954 Female, age 42, unknown 28.1
2785 Male, age 18, unknown 26.9
2584 Male, age 75, left hemisphere 26.0
1904 Male, age 53, unknown 25.7
1821 Female, age 72, unknown 24.6
2823 Male, age 76, right hemisphere 24.1
2725 Female, age 75, unknown 22.5
Substantia nigra
nTPM: 29.4
2699 Male, age 18, unknown 37.3
2583 Male, age 75, right hemisphere 35.3
2409 Female, age 72, unknown 30.7
2590 Female, age 75, unknown 29.1
1851 Male, age 51, unknown 28.8
1916 Female, age 42, unknown 28.3
2665 Male, age 74, both hemispheres 27.7
1889 Female, age 72, unknown 27.1
2241 Male, age 72, unknown 25.2
1941 Male, age 53, unknown 24.3
Superior colliculus
nTPM: 30.9
2664 Male, age 75, both hemispheres 49.8
1995 Male, age 72, unknown 31.5
1913 Female, age 42, unknown 30.3
2668 Female, age 75, unknown 30.2
1796 Male, age 53, unknown 29.8
2261 Male, age 18, unknown 29.7
2087 Female, age 72, unknown 29.2
2587 Male, age 74, left hemisphere 27.6
1839 Male, age 51, unknown 27.5
1895 Male, age 76, right hemisphere 22.9
Ventral tegmental area
nTPM: 26.4
1942 Male, age 51, unknown 30.8
2021 Male, age 53, unknown 27.7
2410 Female, age 72, unknown 27.1
1915 Female, age 42, unknown 25.9
2223 Female, age 72, unknown 24.9
2218 Male, age 76, both hemispheres 22.3

MIDBRAIN - GTEx RNA-seqi
Average nTPM 21.2
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 21.2
Samples: 139

Max nTPM: 43.0
Min nTPM: 10.7
Std nTPM: 5.5
Median nTPM: 20.0
GTEX-1RLM8-0011-R2a-SM-EZ6N4 50-59 years, male 43.0
GTEX-13SLW-0011-R2b-SM-5O9C6 70-79 years, male 42.7
GTEX-12WSA-0011-R2a-SM-57WDK 60-69 years, male 39.2
GTEX-1H1ZS-0011-R2b-SM-CL54Q 70-79 years, male 34.7
GTEX-15EO6-0011-R2a-SM-6M46R 50-59 years, male 34.3
GTEX-13QJC-0011-R2b-SM-5PNUN 60-69 years, female 34.1
GTEX-12ZZX-0011-R2a-SM-5EGLG 40-49 years, female 33.7
GTEX-14PJO-0011-R2a-SM-5ZZVF 60-69 years, male 31.8
GTEX-ZDXO-0011-R2b-SM-4WKFG 60-69 years, male 30.9
GTEX-13CF2-0011-R2a-SM-5L3DC 60-69 years, male 30.4
GTEX-1GN2E-0011-R2a-SM-9WG7D 60-69 years, male 30.1
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 51.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 51.2
FF:10158-103A5 76 years, female 51.2

MIDBRAIN - Pig RNA-seqi
Average nTPM 17.4
Pig sample Sample description nTPM
Midbrain
nTPM: 17.0
Samples: 4

Max nTPM: 20.6
Min nTPM: 13.9
Sample A Female 20.6
Sample B Female 13.9
Sample C Male 17.7
Sample D Male 15.8
Periaqueductal gray
nTPM: 17.4
Samples: 3

Max nTPM: 19.0
Min nTPM: 15.2
Sample B Female 17.9
Sample C Male 19.0
Sample D Male 15.2
Substantia nigra
nTPM: 17.4
Samples: 4

Max nTPM: 19.6
Min nTPM: 15.0
Sample A Female 15.0
Sample B Female 19.6
Sample C Male 16.8
Sample D Male 18.1
Superior colliculi
nTPM: 16.1
Samples: 4

Max nTPM: 18.7
Min nTPM: 14.3
Sample A Female 15.4
Sample B Female 18.7
Sample C Male 14.3
Sample D Male 15.8

MIDBRAIN - Mouse RNA-seqi
Average nTPM 13.5
Mouse sample Sample description nTPM
Midbrain
nTPM: 13.5
Samples: 4

Max nTPM: 15.2
Min nTPM: 11.4
Sample A Male 11.4
Sample B Male 12.8
Sample C Female 14.6
Sample D Female 15.2

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 0.0
68918982 Antisense, RP_050301_02_C10, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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