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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:64.4 nTPM
HPA:64.4 nTPM
GTEx:85.2 nTPM
FANTOM5:27.9 Scaled Tags Per Million
Pig:31.2 nTPM
Mouse:147.3 nTPM
Allen mouse:8.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049830Antibody CAB002015
Glial cells Not detectedHigh
Neuronal cells Not detectedHigh




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 64.4
Sample id Sample description nTPM
Hippocampus
nTPM: 64.4
1898 Male, age 80, left hemisphere 69.7
2148 Female, age 91, left hemisphere 65.3
2621 Female, age 67, right hemisphere 64.8
2529 Female, age 94, left hemisphere 64.0
1911 Female, age 85, right hemisphere 61.7
1855 Male, age 76, left hemisphere 61.1
Dentate gyrus
nTPM: 62.7
1927 Female, age 91, both hemispheres 66.1
2530 Female, age 94, left hemisphere 66.1
2010 Male, age 76, both hemispheres 65.8
2531 Female, age 67, both hemispheres 59.7
2528 Male, age 74, both hemispheres 59.6
2246 Female, age 85, both hemispheres 59.2
Entorhinal gyrus
nTPM: 62.9
2764 Male, age 80, right hemisphere 67.3
1938 Female, age 85, left hemisphere 63.3
2117 Female, age 91, right hemisphere 63.0
2613 Female, age 94, left hemisphere 63.0
2686 Male, age 75, right hemisphere 61.9
1787 Male, age 76, left hemisphere 59.1
Hippocampus, CA1
nTPM: 63.2
2749 Male, age 80, left hemisphere 67.9
1873 Female, age 85, both hemispheres 66.1
2045 Male, age 76, both hemispheres 62.1
2527 Male, age 74, both hemispheres 61.4
2082 Female, age 91, right hemisphere 58.5
Hippocampus, CA2
nTPM: 63.6
1963 Male, age 80, left hemisphere 66.6
1892 Male, age 76, both hemispheres 66.5
2437 Female, age 94, left hemisphere 64.1
1940 Female, age 85, left hemisphere 62.6
2249 Male, age 74, both hemispheres 62.1
2113 Female, age 91, right hemisphere 59.4
Hippocampus, CA3
nTPM: 62.6
1867 Male, age 76, both hemispheres 66.5
2861 Female, age 67, both hemispheres 63.4
2137 Male, age 80, left hemisphere 63.2
1891 Female, age 85, both hemispheres 61.9
2620 Female, age 94, left hemisphere 61.2
2436 Male, age 74, both hemispheres 59.1
Parahippocampal cortex
nTPM: 61.9
2245 Female, age 91, both hemispheres 64.4
1990 Female, age 91, right hemisphere 63.7
1850 Male, age 80, both hemispheres 63.2
2622 Female, age 67, right hemisphere 62.7
2018 Male, age 76, both hemispheres 62.1
2532 Female, age 72, left hemisphere 62.1
2692 Male, age 74, both hemispheres 61.7
1933 Female, age 85, both hemispheres 61.4
2250 Female, age 67, right hemisphere 60.0
2693 Female, age 94, both hemispheres 58.1
Perirhinal gyrus
nTPM: 61.6
1794 Male, age 80, right hemisphere 65.3
1841 Female, age 85, right hemisphere 62.2
1847 Female, age 91, left hemisphere 61.7
2521 Female, age 94, right hemisphere 61.3
2848 Male, age 76, right hemisphere 57.6
Subiculum
nTPM: 63.3
1901 Male, age 80, both hemispheres 66.3
1977 Female, age 85, both hemispheres 65.3
2042 Male, age 76, both hemispheres 63.7
2438 Female, age 94, left hemisphere 62.4
2619 Male, age 74, both hemispheres 61.9
2729 Female, age 91, right hemisphere 60.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 85.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 85.2
Samples: 197

Max nTPM: 181.9
Min nTPM: 31.2
Std nTPM: 25.6
Median nTPM: 81.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 181.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 166.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 165.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 152.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 149.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 144.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 141.9
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 140.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 137.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 132.9
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 129.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.9
FF:10153-102I9 76 years, female 29.7
FF:10169-103B7 60 years, female 26.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 31.2
Samples: 4

Max nTPM: 43.2
Min nTPM: 21.3
Sample A Female 43.2
Sample B Female 27.8
Sample C Male 32.5
Sample D Male 21.3
Entorhinal cortex
nTPM: 30.2
Samples: 4

Max nTPM: 32.1
Min nTPM: 28.1
Sample A Female 29.2
Sample B Female 32.1
Sample C Male 31.5
Sample D Male 28.1
Subiculum
nTPM: 26.1
Samples: 4

Max nTPM: 35.1
Min nTPM: 22.2
Sample A Female 35.1
Sample B Female 24.4
Sample C Male 22.6
Sample D Male 22.2
Ventral hippocampus
nTPM: 28.2
Samples: 4

Max nTPM: 35.8
Min nTPM: 19.0
Sample A Female 27.9
Sample B Female 19.0
Sample C Male 35.8
Sample D Male 29.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 147.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 143.0
Samples: 4

Max nTPM: 157.3
Min nTPM: 129.9
Sample A Male 129.9
Sample B Male 138.9
Sample C Female 145.9
Sample D Female 157.3
Hippocampal formation
nTPM: 147.4
Samples: 4

Max nTPM: 155.3
Min nTPM: 133.0
Sample A Male 147.1
Sample B Male 133.0
Sample C Female 155.3
Sample D Female 154.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.9
67979018 Antisense, RP_040923_01_H09, Mouse strain C57BL/6J (56 days, male) 8.9

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The Human Protein Atlas

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