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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:30.6 nTPM
HPA:30.6 nTPM
GTEx:62.6 nTPM
FANTOM5:87.6 Scaled Tags Per Million
Pig:20.0 nTPM
Mouse:60.1 nTPM
Allen mouse:8.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA009073
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.6
Sample id Sample description nTPM
Hippocampus
nTPM: 11.8
1911 Female, age 85, right hemisphere 24.2
2529 Female, age 94, left hemisphere 17.7
2621 Female, age 67, right hemisphere 13.7
2148 Female, age 91, left hemisphere 8.9
1898 Male, age 80, left hemisphere 6.5
1855 Male, age 76, left hemisphere 0.0
Dentate gyrus
nTPM: 15.3
2530 Female, age 94, left hemisphere 29.5
2528 Male, age 74, both hemispheres 19.7
2010 Male, age 76, both hemispheres 19.2
2246 Female, age 85, both hemispheres 9.3
2531 Female, age 67, both hemispheres 9.0
1927 Female, age 91, both hemispheres 4.8
Entorhinal gyrus
nTPM: 29.7
2764 Male, age 80, right hemisphere 52.8
2117 Female, age 91, right hemisphere 47.5
2613 Female, age 94, left hemisphere 32.4
1787 Male, age 76, left hemisphere 16.5
2686 Male, age 75, right hemisphere 15.7
1938 Female, age 85, left hemisphere 13.4
Hippocampus, CA1
nTPM: 8.5
2527 Male, age 74, both hemispheres 13.3
2749 Male, age 80, left hemisphere 12.5
2082 Female, age 91, right hemisphere 12.0
1873 Female, age 85, both hemispheres 5.0
2045 Male, age 76, both hemispheres 0.0
Hippocampus, CA2
nTPM: 16.8
1963 Male, age 80, left hemisphere 25.4
2249 Male, age 74, both hemispheres 21.6
2437 Female, age 94, left hemisphere 21.3
2113 Female, age 91, right hemisphere 17.5
1940 Female, age 85, left hemisphere 14.9
1892 Male, age 76, both hemispheres 0.0
Hippocampus, CA3
nTPM: 15.2
2620 Female, age 94, left hemisphere 49.7
1891 Female, age 85, both hemispheres 31.2
1867 Male, age 76, both hemispheres 9.8
2137 Male, age 80, left hemisphere 0.5
2436 Male, age 74, both hemispheres 0.0
2861 Female, age 67, both hemispheres 0.0
Parahippocampal cortex
nTPM: 16.8
2692 Male, age 74, both hemispheres 38.7
1990 Female, age 91, right hemisphere 34.5
2532 Female, age 72, left hemisphere 29.8
2693 Female, age 94, both hemispheres 14.8
2245 Female, age 91, both hemispheres 13.9
1850 Male, age 80, both hemispheres 13.4
1933 Female, age 85, both hemispheres 10.3
2018 Male, age 76, both hemispheres 6.4
2622 Female, age 67, right hemisphere 6.2
2250 Female, age 67, right hemisphere 0.0
Perirhinal gyrus
nTPM: 4.0
1794 Male, age 80, right hemisphere 10.2
2521 Female, age 94, right hemisphere 8.4
1847 Female, age 91, left hemisphere 1.3
2848 Male, age 76, right hemisphere 0.2
1841 Female, age 85, right hemisphere 0.0
Subiculum
nTPM: 30.6
2042 Male, age 76, both hemispheres 51.8
1901 Male, age 80, both hemispheres 44.7
1977 Female, age 85, both hemispheres 31.0
2619 Male, age 74, both hemispheres 29.4
2438 Female, age 94, left hemisphere 13.6
2729 Female, age 91, right hemisphere 13.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 62.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 62.6
Samples: 197

Max nTPM: 269.8
Min nTPM: 7.6
Std nTPM: 39.6
Median nTPM: 51.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 269.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 245.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 190.7
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 161.6
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 158.5
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 157.5
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 157.2
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 157.2
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 154.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 148.3
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 147.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 87.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 87.6
FF:10153-102I9 76 years, female 97.8
FF:10169-103B7 60 years, female 77.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 20.0
Samples: 4

Max nTPM: 29.6
Min nTPM: 8.9
Sample A Female 29.6
Sample B Female 18.9
Sample C Male 22.7
Sample D Male 8.9
Entorhinal cortex
nTPM: 12.4
Samples: 4

Max nTPM: 14.8
Min nTPM: 10.3
Sample A Female 10.3
Sample B Female 13.4
Sample C Male 14.8
Sample D Male 11.2
Subiculum
nTPM: 14.5
Samples: 4

Max nTPM: 21.5
Min nTPM: 10.1
Sample A Female 21.5
Sample B Female 13.8
Sample C Male 12.4
Sample D Male 10.1
Ventral hippocampus
nTPM: 17.2
Samples: 4

Max nTPM: 20.8
Min nTPM: 10.9
Sample A Female 19.7
Sample B Female 10.9
Sample C Male 20.8
Sample D Male 17.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 60.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 50.6
Samples: 4

Max nTPM: 60.2
Min nTPM: 42.0
Sample A Male 60.2
Sample B Male 53.1
Sample C Female 46.9
Sample D Female 42.0
Hippocampal formation
nTPM: 60.1
Samples: 4

Max nTPM: 68.8
Min nTPM: 46.8
Sample A Male 46.8
Sample B Male 58.6
Sample C Female 66.2
Sample D Female 68.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.2
71213880 Antisense, RP_050816_04_H10, Mouse strain C57BL/6J (56 days, male) 8.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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