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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:38.2 nTPM
HPA:38.2 nTPM
GTEx:26.4 nTPM
FANTOM5:26.8 Scaled Tags Per Million
Pig:38.5 nTPM
Mouse:122.1 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 38.2
Sample id Sample description nTPM
Hippocampus
nTPM: 36.3
2529 Female, age 94, left hemisphere 39.3
1911 Female, age 85, right hemisphere 38.5
1898 Male, age 80, left hemisphere 37.5
1855 Male, age 76, left hemisphere 37.1
2621 Female, age 67, right hemisphere 32.9
2148 Female, age 91, left hemisphere 32.2
Dentate gyrus
nTPM: 36.7
1927 Female, age 91, both hemispheres 38.4
2246 Female, age 85, both hemispheres 38.0
2010 Male, age 76, both hemispheres 37.9
2528 Male, age 74, both hemispheres 36.8
2530 Female, age 94, left hemisphere 36.4
2531 Female, age 67, both hemispheres 32.6
Entorhinal gyrus
nTPM: 34.5
1787 Male, age 76, left hemisphere 36.6
1938 Female, age 85, left hemisphere 36.1
2764 Male, age 80, right hemisphere 34.9
2117 Female, age 91, right hemisphere 34.1
2613 Female, age 94, left hemisphere 33.7
2686 Male, age 75, right hemisphere 31.5
Hippocampus, CA1
nTPM: 37.2
1873 Female, age 85, both hemispheres 39.1
2749 Male, age 80, left hemisphere 38.9
2045 Male, age 76, both hemispheres 38.7
2527 Male, age 74, both hemispheres 35.9
2082 Female, age 91, right hemisphere 33.5
Hippocampus, CA2
nTPM: 35.9
2249 Male, age 74, both hemispheres 41.6
1892 Male, age 76, both hemispheres 37.3
2113 Female, age 91, right hemisphere 36.3
1940 Female, age 85, left hemisphere 34.9
1963 Male, age 80, left hemisphere 32.9
2437 Female, age 94, left hemisphere 32.6
Hippocampus, CA3
nTPM: 35.9
2436 Male, age 74, both hemispheres 38.4
1891 Female, age 85, both hemispheres 37.9
1867 Male, age 76, both hemispheres 37.6
2137 Male, age 80, left hemisphere 37.4
2620 Female, age 94, left hemisphere 32.6
2861 Female, age 67, both hemispheres 31.4
Parahippocampal cortex
nTPM: 35.3
1850 Male, age 80, both hemispheres 39.9
2018 Male, age 76, both hemispheres 36.8
2250 Female, age 67, right hemisphere 36.5
2693 Female, age 94, both hemispheres 36.4
1990 Female, age 91, right hemisphere 35.8
1933 Female, age 85, both hemispheres 35.4
2532 Female, age 72, left hemisphere 34.7
2245 Female, age 91, both hemispheres 34.1
2692 Male, age 74, both hemispheres 32.4
2622 Female, age 67, right hemisphere 31.2
Perirhinal gyrus
nTPM: 38.2
1841 Female, age 85, right hemisphere 40.7
1794 Male, age 80, right hemisphere 40.3
1847 Female, age 91, left hemisphere 38.0
2848 Male, age 76, right hemisphere 37.8
2521 Female, age 94, right hemisphere 34.0
Subiculum
nTPM: 35.7
1901 Male, age 80, both hemispheres 38.2
2438 Female, age 94, left hemisphere 37.5
1977 Female, age 85, both hemispheres 36.0
2042 Male, age 76, both hemispheres 35.1
2729 Female, age 91, right hemisphere 34.2
2619 Male, age 74, both hemispheres 32.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.4
Samples: 197

Max nTPM: 60.9
Min nTPM: 9.5
Std nTPM: 9.2
Median nTPM: 25.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 60.9
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 55.3
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 51.6
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 51.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 47.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 46.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 45.8
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 44.6
GTEX-ZUA1-0011-R1a-SM-4YCE2 40-49 years, male 44.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 43.8
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 43.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.8
FF:10169-103B7 60 years, female 33.4
FF:10153-102I9 76 years, female 20.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 38.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 38.5
Samples: 4

Max nTPM: 54.2
Min nTPM: 29.9
Sample A Female 54.2
Sample B Female 35.0
Sample C Male 34.7
Sample D Male 29.9
Entorhinal cortex
nTPM: 31.0
Samples: 4

Max nTPM: 43.0
Min nTPM: 22.4
Sample A Female 28.1
Sample B Female 43.0
Sample C Male 30.3
Sample D Male 22.4
Subiculum
nTPM: 32.3
Samples: 4

Max nTPM: 43.3
Min nTPM: 26.5
Sample A Female 43.3
Sample B Female 28.7
Sample C Male 26.5
Sample D Male 30.6
Ventral hippocampus
nTPM: 30.5
Samples: 4

Max nTPM: 33.3
Min nTPM: 28.9
Sample A Female 33.3
Sample B Female 29.8
Sample C Male 28.9
Sample D Male 30.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 122.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 116.3
Samples: 4

Max nTPM: 130.6
Min nTPM: 102.0
Sample A Male 102.0
Sample B Male 116.6
Sample C Female 130.6
Sample D Female 116.0
Hippocampal formation
nTPM: 122.1
Samples: 4

Max nTPM: 135.0
Min nTPM: 113.3
Sample A Male 135.0
Sample B Male 113.3
Sample C Female 120.3
Sample D Female 119.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
68844606 Antisense, RP_050222_02_A08, Mouse strain C57BL/6J (56 days, male) 0.5

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