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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:75.2 nTPM
HPA:75.2 nTPM
GTEx:76.7 nTPM
FANTOM5:82.0 Scaled Tags Per Million
Pig:94.5 nTPM
Mouse:226.4 nTPM
Allen mouse:10.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 75.2
Sample id Sample description nTPM
Hippocampus
nTPM: 74.5
1898 Male, age 80, left hemisphere 80.4
1855 Male, age 76, left hemisphere 75.2
1911 Female, age 85, right hemisphere 74.7
2529 Female, age 94, left hemisphere 73.4
2621 Female, age 67, right hemisphere 72.4
2148 Female, age 91, left hemisphere 70.8
Dentate gyrus
nTPM: 73.7
2528 Male, age 74, both hemispheres 77.0
2010 Male, age 76, both hemispheres 76.9
1927 Female, age 91, both hemispheres 74.1
2246 Female, age 85, both hemispheres 73.2
2530 Female, age 94, left hemisphere 71.7
2531 Female, age 67, both hemispheres 69.2
Entorhinal gyrus
nTPM: 72.0
1938 Female, age 85, left hemisphere 75.5
2117 Female, age 91, right hemisphere 75.4
1787 Male, age 76, left hemisphere 73.2
2764 Male, age 80, right hemisphere 70.3
2686 Male, age 75, right hemisphere 68.9
2613 Female, age 94, left hemisphere 68.8
Hippocampus, CA1
nTPM: 75.1
2749 Male, age 80, left hemisphere 79.9
1873 Female, age 85, both hemispheres 76.3
2527 Male, age 74, both hemispheres 74.9
2082 Female, age 91, right hemisphere 72.5
2045 Male, age 76, both hemispheres 71.8
Hippocampus, CA2
nTPM: 75.0
2249 Male, age 74, both hemispheres 79.8
1892 Male, age 76, both hemispheres 76.7
1963 Male, age 80, left hemisphere 76.7
1940 Female, age 85, left hemisphere 73.0
2113 Female, age 91, right hemisphere 72.3
2437 Female, age 94, left hemisphere 71.8
Hippocampus, CA3
nTPM: 73.6
2436 Male, age 74, both hemispheres 80.3
1891 Female, age 85, both hemispheres 76.4
1867 Male, age 76, both hemispheres 74.9
2137 Male, age 80, left hemisphere 74.6
2620 Female, age 94, left hemisphere 68.8
2861 Female, age 67, both hemispheres 66.4
Parahippocampal cortex
nTPM: 72.8
1933 Female, age 85, both hemispheres 75.7
1990 Female, age 91, right hemisphere 75.6
1850 Male, age 80, both hemispheres 74.7
2250 Female, age 67, right hemisphere 74.4
2018 Male, age 76, both hemispheres 73.8
2693 Female, age 94, both hemispheres 73.6
2532 Female, age 72, left hemisphere 72.0
2692 Male, age 74, both hemispheres 71.3
2245 Female, age 91, both hemispheres 69.9
2622 Female, age 67, right hemisphere 66.4
Perirhinal gyrus
nTPM: 75.2
1841 Female, age 85, right hemisphere 77.3
2521 Female, age 94, right hemisphere 76.0
1794 Male, age 80, right hemisphere 74.8
1847 Female, age 91, left hemisphere 74.4
2848 Male, age 76, right hemisphere 73.4
Subiculum
nTPM: 73.4
1977 Female, age 85, both hemispheres 77.0
1901 Male, age 80, both hemispheres 74.7
2042 Male, age 76, both hemispheres 74.2
2729 Female, age 91, right hemisphere 72.9
2619 Male, age 74, both hemispheres 71.0
2438 Female, age 94, left hemisphere 70.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 76.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 76.7
Samples: 197

Max nTPM: 135.4
Min nTPM: 47.1
Std nTPM: 16.4
Median nTPM: 73.5
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 135.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 134.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 129.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 126.8
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 124.0
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 122.3
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 119.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 113.2
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 107.6
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 106.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 104.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 82.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 82.0
FF:10169-103B7 60 years, female 87.8
FF:10153-102I9 76 years, female 76.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 94.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 94.5
Samples: 4

Max nTPM: 142.2
Min nTPM: 68.2
Sample A Female 142.2
Sample B Female 85.1
Sample C Male 82.6
Sample D Male 68.2
Entorhinal cortex
nTPM: 70.0
Samples: 4

Max nTPM: 84.9
Min nTPM: 51.3
Sample A Female 73.8
Sample B Female 84.9
Sample C Male 70.0
Sample D Male 51.3
Subiculum
nTPM: 69.1
Samples: 4

Max nTPM: 98.0
Min nTPM: 54.8
Sample A Female 98.0
Sample B Female 63.4
Sample C Male 54.8
Sample D Male 60.3
Ventral hippocampus
nTPM: 81.6
Samples: 4

Max nTPM: 95.4
Min nTPM: 57.0
Sample A Female 95.4
Sample B Female 57.0
Sample C Male 89.1
Sample D Male 84.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 226.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 196.6
Samples: 4

Max nTPM: 208.6
Min nTPM: 169.9
Sample A Male 207.2
Sample B Male 208.6
Sample C Female 200.7
Sample D Female 169.9
Hippocampal formation
nTPM: 226.4
Samples: 4

Max nTPM: 231.4
Min nTPM: 220.8
Sample A Male 231.4
Sample B Male 220.8
Sample C Female 223.7
Sample D Female 229.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.8
671225 Antisense, RP_040914_01_G11, Mouse strain C57BL/6J (56 days, male) 10.8

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The Human Protein Atlas

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