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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:103.6 nTPM
HPA:103.6 nTPM
GTEx:231.3 nTPM
FANTOM5:462.5 Scaled Tags Per Million
Pig:91.9 nTPM
Mouse:67.1 nTPM
Allen mouse:3.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 103.6
Sample id Sample description nTPM
Hippocampus
nTPM: 94.0
2529 Female, age 94, left hemisphere 113.7
1911 Female, age 85, right hemisphere 97.7
1855 Male, age 76, left hemisphere 89.7
1898 Male, age 80, left hemisphere 88.7
2621 Female, age 67, right hemisphere 88.6
2148 Female, age 91, left hemisphere 85.6
Dentate gyrus
nTPM: 85.6
2530 Female, age 94, left hemisphere 118.7
2010 Male, age 76, both hemispheres 90.4
2528 Male, age 74, both hemispheres 85.7
2531 Female, age 67, both hemispheres 78.1
2246 Female, age 85, both hemispheres 70.9
1927 Female, age 91, both hemispheres 69.5
Entorhinal gyrus
nTPM: 99.2
2117 Female, age 91, right hemisphere 137.7
2764 Male, age 80, right hemisphere 111.4
2686 Male, age 75, right hemisphere 96.7
2613 Female, age 94, left hemisphere 95.1
1938 Female, age 85, left hemisphere 84.8
1787 Male, age 76, left hemisphere 69.4
Hippocampus, CA1
nTPM: 79.0
2527 Male, age 74, both hemispheres 92.7
2082 Female, age 91, right hemisphere 91.9
1873 Female, age 85, both hemispheres 77.9
2749 Male, age 80, left hemisphere 74.5
2045 Male, age 76, both hemispheres 58.0
Hippocampus, CA2
nTPM: 90.0
1963 Male, age 80, left hemisphere 117.6
2437 Female, age 94, left hemisphere 101.2
2113 Female, age 91, right hemisphere 96.3
2249 Male, age 74, both hemispheres 90.7
1940 Female, age 85, left hemisphere 71.6
1892 Male, age 76, both hemispheres 62.8
Hippocampus, CA3
nTPM: 72.0
1891 Female, age 85, both hemispheres 96.7
1867 Male, age 76, both hemispheres 80.6
2861 Female, age 67, both hemispheres 77.5
2436 Male, age 74, both hemispheres 66.2
2137 Male, age 80, left hemisphere 57.1
2620 Female, age 94, left hemisphere 53.9
Parahippocampal cortex
nTPM: 85.1
2692 Male, age 74, both hemispheres 105.8
2532 Female, age 72, left hemisphere 91.8
1990 Female, age 91, right hemisphere 91.0
2245 Female, age 91, both hemispheres 84.2
2250 Female, age 67, right hemisphere 84.2
1933 Female, age 85, both hemispheres 81.6
2622 Female, age 67, right hemisphere 80.7
1850 Male, age 80, both hemispheres 79.7
2018 Male, age 76, both hemispheres 76.8
2693 Female, age 94, both hemispheres 75.2
Perirhinal gyrus
nTPM: 69.1
2521 Female, age 94, right hemisphere 78.7
1847 Female, age 91, left hemisphere 75.4
1794 Male, age 80, right hemisphere 71.2
1841 Female, age 85, right hemisphere 62.8
2848 Male, age 76, right hemisphere 57.5
Subiculum
nTPM: 103.6
2042 Male, age 76, both hemispheres 121.5
1901 Male, age 80, both hemispheres 107.8
2438 Female, age 94, left hemisphere 102.2
1977 Female, age 85, both hemispheres 100.2
2619 Male, age 74, both hemispheres 96.8
2729 Female, age 91, right hemisphere 93.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 231.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 231.3
Samples: 197

Max nTPM: 616.4
Min nTPM: 11.0
Std nTPM: 107.1
Median nTPM: 219.4
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 616.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 535.6
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 505.1
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 477.7
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 475.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 474.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 468.4
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 458.2
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 446.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 442.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 432.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 462.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 462.5
FF:10169-103B7 60 years, female 485.5
FF:10153-102I9 76 years, female 439.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 91.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 91.9
Samples: 4

Max nTPM: 138.9
Min nTPM: 38.6
Sample A Female 138.9
Sample B Female 73.0
Sample C Male 117.0
Sample D Male 38.6
Entorhinal cortex
nTPM: 59.5
Samples: 4

Max nTPM: 70.0
Min nTPM: 49.6
Sample A Female 49.6
Sample B Female 70.0
Sample C Male 65.1
Sample D Male 53.2
Subiculum
nTPM: 69.2
Samples: 4

Max nTPM: 98.3
Min nTPM: 53.5
Sample A Female 98.3
Sample B Female 71.0
Sample C Male 53.5
Sample D Male 53.9
Ventral hippocampus
nTPM: 80.0
Samples: 4

Max nTPM: 95.3
Min nTPM: 57.4
Sample A Female 92.2
Sample B Female 57.4
Sample C Male 95.3
Sample D Male 75.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 67.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 50.1
Samples: 4

Max nTPM: 56.7
Min nTPM: 42.3
Sample A Male 56.7
Sample B Male 50.0
Sample C Female 51.4
Sample D Female 42.3
Hippocampal formation
nTPM: 67.2
Samples: 4

Max nTPM: 79.8
Min nTPM: 51.0
Sample A Male 51.0
Sample B Male 62.3
Sample C Female 79.8
Sample D Female 75.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.8
70437828 Antisense, RP_050614_03_A03, Mouse strain C57BL/6J (56 days, male) 3.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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