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RNF220
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:36.2 nTPM
HPA:36.2 nTPM
GTEx:45.1 nTPM
FANTOM5:188.8 Scaled Tags Per Million
Pig:107.9 nTPM
Mouse:110.7 nTPM
Allen mouse:8.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027578
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 36.2
Sample id Sample description nTPM
Hippocampus
nTPM: 23.0
2529 Female, age 94, left hemisphere 29.5
2621 Female, age 67, right hemisphere 28.1
1911 Female, age 85, right hemisphere 26.4
2148 Female, age 91, left hemisphere 20.2
1898 Male, age 80, left hemisphere 18.2
1855 Male, age 76, left hemisphere 15.4
Dentate gyrus
nTPM: 26.8
2530 Female, age 94, left hemisphere 46.6
2010 Male, age 76, both hemispheres 27.1
1927 Female, age 91, both hemispheres 23.0
2246 Female, age 85, both hemispheres 22.7
2531 Female, age 67, both hemispheres 21.0
2528 Male, age 74, both hemispheres 20.8
Entorhinal gyrus
nTPM: 28.9
2613 Female, age 94, left hemisphere 36.5
2764 Male, age 80, right hemisphere 36.3
2117 Female, age 91, right hemisphere 33.1
1787 Male, age 76, left hemisphere 24.1
2686 Male, age 75, right hemisphere 22.5
1938 Female, age 85, left hemisphere 20.8
Hippocampus, CA1
nTPM: 16.7
1873 Female, age 85, both hemispheres 23.3
2082 Female, age 91, right hemisphere 20.1
2527 Male, age 74, both hemispheres 19.8
2749 Male, age 80, left hemisphere 14.0
2045 Male, age 76, both hemispheres 6.2
Hippocampus, CA2
nTPM: 26.2
1963 Male, age 80, left hemisphere 30.9
2437 Female, age 94, left hemisphere 30.7
1940 Female, age 85, left hemisphere 26.2
2249 Male, age 74, both hemispheres 25.4
1892 Male, age 76, both hemispheres 24.5
2113 Female, age 91, right hemisphere 19.4
Hippocampus, CA3
nTPM: 17.7
1891 Female, age 85, both hemispheres 35.1
1867 Male, age 76, both hemispheres 20.2
2620 Female, age 94, left hemisphere 13.5
2436 Male, age 74, both hemispheres 13.3
2137 Male, age 80, left hemisphere 12.4
2861 Female, age 67, both hemispheres 11.4
Parahippocampal cortex
nTPM: 21.9
2532 Female, age 72, left hemisphere 32.1
2692 Male, age 74, both hemispheres 31.4
1990 Female, age 91, right hemisphere 28.4
2245 Female, age 91, both hemispheres 23.5
1850 Male, age 80, both hemispheres 21.9
2018 Male, age 76, both hemispheres 20.8
1933 Female, age 85, both hemispheres 19.4
2693 Female, age 94, both hemispheres 16.4
2622 Female, age 67, right hemisphere 13.6
2250 Female, age 67, right hemisphere 11.8
Perirhinal gyrus
nTPM: 15.9
2848 Male, age 76, right hemisphere 19.6
1794 Male, age 80, right hemisphere 18.5
2521 Female, age 94, right hemisphere 15.5
1847 Female, age 91, left hemisphere 14.2
1841 Female, age 85, right hemisphere 11.5
Subiculum
nTPM: 36.2
2042 Male, age 76, both hemispheres 49.1
2438 Female, age 94, left hemisphere 43.9
1901 Male, age 80, both hemispheres 41.9
1977 Female, age 85, both hemispheres 33.4
2619 Male, age 74, both hemispheres 29.2
2729 Female, age 91, right hemisphere 19.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 45.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 45.1
Samples: 197

Max nTPM: 146.1
Min nTPM: 8.1
Std nTPM: 27.4
Median nTPM: 36.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 146.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 139.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 135.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 126.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 123.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 122.0
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 117.5
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 113.8
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 111.3
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 104.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 102.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 188.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 188.8
FF:10153-102I9 76 years, female 239.5
FF:10169-103B7 60 years, female 138.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 107.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 107.9
Samples: 4

Max nTPM: 134.4
Min nTPM: 67.5
Sample A Female 134.4
Sample B Female 100.0
Sample C Male 129.6
Sample D Male 67.5
Entorhinal cortex
nTPM: 103.0
Samples: 4

Max nTPM: 108.2
Min nTPM: 96.1
Sample A Female 102.1
Sample B Female 105.4
Sample C Male 108.2
Sample D Male 96.1
Subiculum
nTPM: 95.7
Samples: 4

Max nTPM: 126.9
Min nTPM: 77.9
Sample A Female 126.9
Sample B Female 89.2
Sample C Male 88.6
Sample D Male 77.9
Ventral hippocampus
nTPM: 97.2
Samples: 4

Max nTPM: 116.2
Min nTPM: 69.5
Sample A Female 90.8
Sample B Female 69.5
Sample C Male 112.4
Sample D Male 116.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 110.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 110.7
Samples: 4

Max nTPM: 115.2
Min nTPM: 103.0
Sample A Male 112.8
Sample B Male 111.7
Sample C Female 103.0
Sample D Female 115.2
Hippocampal formation
nTPM: 103.7
Samples: 4

Max nTPM: 113.5
Min nTPM: 97.3
Sample A Male 97.3
Sample B Male 105.8
Sample C Female 113.5
Sample D Female 98.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.8
71924364 Antisense, RP_050623_01_G04, Mouse strain C57BL/6J (56 days, male) 8.8
70528073 Antisense, RP_050623_01_G04, Mouse strain C57BL/6J (56 days, male) 7.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.