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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:72.0 nTPM
HPA:72.0 nTPM
GTEx:82.4 nTPM
FANTOM5:43.8 Scaled Tags Per Million
Pig:32.8 nTPM
Mouse:68.1 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015662Antibody HPA023277
Glial cells Not detectedMedium
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 72.0
Sample id Sample description nTPM
Hippocampus
nTPM: 56.8
1911 Female, age 85, right hemisphere 63.8
2529 Female, age 94, left hemisphere 59.9
2621 Female, age 67, right hemisphere 56.5
1898 Male, age 80, left hemisphere 55.2
1855 Male, age 76, left hemisphere 54.9
2148 Female, age 91, left hemisphere 50.4
Dentate gyrus
nTPM: 60.2
2530 Female, age 94, left hemisphere 84.1
2010 Male, age 76, both hemispheres 62.1
2528 Male, age 74, both hemispheres 59.5
2246 Female, age 85, both hemispheres 56.8
2531 Female, age 67, both hemispheres 54.7
1927 Female, age 91, both hemispheres 44.0
Entorhinal gyrus
nTPM: 65.8
2117 Female, age 91, right hemisphere 80.4
2764 Male, age 80, right hemisphere 79.4
2686 Male, age 75, right hemisphere 66.7
2613 Female, age 94, left hemisphere 58.5
1938 Female, age 85, left hemisphere 55.1
1787 Male, age 76, left hemisphere 54.6
Hippocampus, CA1
nTPM: 55.0
2045 Male, age 76, both hemispheres 60.4
2082 Female, age 91, right hemisphere 60.1
2527 Male, age 74, both hemispheres 58.5
1873 Female, age 85, both hemispheres 52.0
2749 Male, age 80, left hemisphere 44.2
Hippocampus, CA2
nTPM: 57.8
2249 Male, age 74, both hemispheres 64.9
1963 Male, age 80, left hemisphere 61.9
1940 Female, age 85, left hemisphere 60.4
2437 Female, age 94, left hemisphere 57.4
2113 Female, age 91, right hemisphere 55.7
1892 Male, age 76, both hemispheres 46.4
Hippocampus, CA3
nTPM: 52.1
1891 Female, age 85, both hemispheres 69.3
2620 Female, age 94, left hemisphere 67.7
1867 Male, age 76, both hemispheres 48.9
2436 Male, age 74, both hemispheres 46.5
2861 Female, age 67, both hemispheres 41.5
2137 Male, age 80, left hemisphere 39.0
Parahippocampal cortex
nTPM: 56.9
2532 Female, age 72, left hemisphere 69.3
2692 Male, age 74, both hemispheres 68.7
2018 Male, age 76, both hemispheres 61.7
1990 Female, age 91, right hemisphere 59.5
1850 Male, age 80, both hemispheres 58.9
2693 Female, age 94, both hemispheres 56.5
1933 Female, age 85, both hemispheres 55.0
2245 Female, age 91, both hemispheres 50.8
2250 Female, age 67, right hemisphere 44.5
2622 Female, age 67, right hemisphere 43.7
Perirhinal gyrus
nTPM: 52.3
2848 Male, age 76, right hemisphere 62.1
1794 Male, age 80, right hemisphere 55.4
2521 Female, age 94, right hemisphere 54.9
1841 Female, age 85, right hemisphere 44.6
1847 Female, age 91, left hemisphere 44.4
Subiculum
nTPM: 72.0
2042 Male, age 76, both hemispheres 93.7
1901 Male, age 80, both hemispheres 78.7
1977 Female, age 85, both hemispheres 74.1
2619 Male, age 74, both hemispheres 64.9
2729 Female, age 91, right hemisphere 62.1
2438 Female, age 94, left hemisphere 58.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 82.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 82.4
Samples: 197

Max nTPM: 350.8
Min nTPM: 20.2
Std nTPM: 49.0
Median nTPM: 70.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 350.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 232.3
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 220.3
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 217.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 209.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 203.3
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 201.9
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 186.0
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 184.2
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 177.5
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 171.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 43.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 43.8
FF:10153-102I9 76 years, female 61.5
FF:10169-103B7 60 years, female 26.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 32.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 32.8
Samples: 4

Max nTPM: 41.5
Min nTPM: 19.8
Sample A Female 39.8
Sample B Female 30.0
Sample C Male 41.5
Sample D Male 19.8
Entorhinal cortex
nTPM: 18.7
Samples: 4

Max nTPM: 19.2
Min nTPM: 18.3
Sample A Female 18.5
Sample B Female 18.3
Sample C Male 18.6
Sample D Male 19.2
Subiculum
nTPM: 23.0
Samples: 4

Max nTPM: 25.4
Min nTPM: 20.5
Sample A Female 24.6
Sample B Female 25.4
Sample C Male 21.4
Sample D Male 20.5
Ventral hippocampus
nTPM: 28.0
Samples: 4

Max nTPM: 32.3
Min nTPM: 20.9
Sample A Female 27.1
Sample B Female 20.9
Sample C Male 32.3
Sample D Male 31.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 68.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 50.5
Samples: 4

Max nTPM: 53.5
Min nTPM: 45.8
Sample A Male 53.5
Sample B Male 45.8
Sample C Female 52.9
Sample D Female 49.8
Hippocampal formation
nTPM: 68.2
Samples: 4

Max nTPM: 98.4
Min nTPM: 46.4
Sample A Male 46.4
Sample B Male 61.8
Sample C Female 98.4
Sample D Female 66.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
947 Antisense, RP_Baylor_103028, Mouse strain C57BL/6J (56 days, male) 0.2
945 Antisense, RP_Baylor_103028, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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