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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:42.4 nTPM
HPA:42.4 nTPM
GTEx:44.5 nTPM
FANTOM5:63.1 Scaled Tags Per Million
Pig:33.2 nTPM
Mouse:33.1 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 42.4
Sample id Sample description nTPM
Hippocampus
nTPM: 41.0
1898 Male, age 80, left hemisphere 42.5
1911 Female, age 85, right hemisphere 41.6
2529 Female, age 94, left hemisphere 41.5
1855 Male, age 76, left hemisphere 41.4
2148 Female, age 91, left hemisphere 39.8
2621 Female, age 67, right hemisphere 39.2
Dentate gyrus
nTPM: 40.7
1927 Female, age 91, both hemispheres 42.8
2528 Male, age 74, both hemispheres 42.6
2010 Male, age 76, both hemispheres 41.9
2246 Female, age 85, both hemispheres 41.0
2531 Female, age 67, both hemispheres 37.9
2530 Female, age 94, left hemisphere 37.8
Entorhinal gyrus
nTPM: 39.6
2117 Female, age 91, right hemisphere 40.8
1938 Female, age 85, left hemisphere 40.5
2764 Male, age 80, right hemisphere 39.9
1787 Male, age 76, left hemisphere 39.4
2686 Male, age 75, right hemisphere 39.2
2613 Female, age 94, left hemisphere 37.9
Hippocampus, CA1
nTPM: 41.9
2749 Male, age 80, left hemisphere 43.4
2082 Female, age 91, right hemisphere 42.8
2045 Male, age 76, both hemispheres 41.7
1873 Female, age 85, both hemispheres 41.1
2527 Male, age 74, both hemispheres 40.7
Hippocampus, CA2
nTPM: 41.8
2249 Male, age 74, both hemispheres 45.6
1892 Male, age 76, both hemispheres 41.6
1940 Female, age 85, left hemisphere 41.6
1963 Male, age 80, left hemisphere 41.1
2113 Female, age 91, right hemisphere 41.0
2437 Female, age 94, left hemisphere 39.6
Hippocampus, CA3
nTPM: 42.4
2436 Male, age 74, both hemispheres 49.8
2137 Male, age 80, left hemisphere 44.0
1867 Male, age 76, both hemispheres 42.5
1891 Female, age 85, both hemispheres 41.3
2620 Female, age 94, left hemisphere 39.2
2861 Female, age 67, both hemispheres 37.7
Parahippocampal cortex
nTPM: 40.3
1850 Male, age 80, both hemispheres 41.6
1933 Female, age 85, both hemispheres 40.9
2250 Female, age 67, right hemisphere 40.9
1990 Female, age 91, right hemisphere 40.7
2018 Male, age 76, both hemispheres 40.6
2245 Female, age 91, both hemispheres 40.4
2693 Female, age 94, both hemispheres 40.2
2692 Male, age 74, both hemispheres 39.6
2532 Female, age 72, left hemisphere 39.1
2622 Female, age 67, right hemisphere 38.7
Perirhinal gyrus
nTPM: 41.8
1847 Female, age 91, left hemisphere 42.9
1841 Female, age 85, right hemisphere 42.6
2521 Female, age 94, right hemisphere 41.8
1794 Male, age 80, right hemisphere 41.7
2848 Male, age 76, right hemisphere 39.8
Subiculum
nTPM: 40.4
2729 Female, age 91, right hemisphere 42.3
1901 Male, age 80, both hemispheres 41.4
2042 Male, age 76, both hemispheres 39.9
2619 Male, age 74, both hemispheres 39.9
2438 Female, age 94, left hemisphere 39.7
1977 Female, age 85, both hemispheres 39.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 44.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.5
Samples: 197

Max nTPM: 132.2
Min nTPM: 14.1
Std nTPM: 16.4
Median nTPM: 41.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 132.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 109.6
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 92.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 84.8
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 84.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 82.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 79.9
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 79.6
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 78.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 77.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 75.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 63.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 63.1
FF:10169-103B7 60 years, female 79.5
FF:10153-102I9 76 years, female 46.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 33.2
Samples: 4

Max nTPM: 43.4
Min nTPM: 22.1
Sample A Female 43.4
Sample B Female 28.2
Sample C Male 39.1
Sample D Male 22.1
Entorhinal cortex
nTPM: 29.5
Samples: 4

Max nTPM: 41.3
Min nTPM: 20.3
Sample A Female 29.5
Sample B Female 41.3
Sample C Male 26.9
Sample D Male 20.3
Subiculum
nTPM: 27.3
Samples: 4

Max nTPM: 36.9
Min nTPM: 21.8
Sample A Female 36.9
Sample B Female 27.9
Sample C Male 21.8
Sample D Male 22.6
Ventral hippocampus
nTPM: 27.6
Samples: 4

Max nTPM: 37.0
Min nTPM: 20.2
Sample A Female 37.0
Sample B Female 23.1
Sample C Male 20.2
Sample D Male 29.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.8
Samples: 4

Max nTPM: 36.3
Min nTPM: 30.3
Sample A Male 34.4
Sample B Male 30.3
Sample C Female 36.3
Sample D Female 30.3
Hippocampal formation
nTPM: 33.2
Samples: 4

Max nTPM: 37.6
Min nTPM: 28.2
Sample A Male 37.6
Sample B Male 28.2
Sample C Female 30.6
Sample D Female 36.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71210514 Antisense, RP_050810_04_C12, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

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