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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:174.0 nTPM
HPA:174.0 nTPM
GTEx:163.2 nTPM
FANTOM5:319.8 Scaled Tags Per Million
Pig:161.2 nTPM
Mouse:451.3 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043640Antibody HPA046280Antibody CAB010880
Glial cells Not detectedNot detectedNot detected
Neuronal cells LowMediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 174.0
Sample id Sample description nTPM
Hippocampus
nTPM: 135.7
1898 Male, age 80, left hemisphere 162.4
2529 Female, age 94, left hemisphere 142.5
2621 Female, age 67, right hemisphere 137.0
2148 Female, age 91, left hemisphere 128.7
1855 Male, age 76, left hemisphere 124.1
1911 Female, age 85, right hemisphere 119.6
Dentate gyrus
nTPM: 141.7
1927 Female, age 91, both hemispheres 149.2
2528 Male, age 74, both hemispheres 148.2
2530 Female, age 94, left hemisphere 146.2
2246 Female, age 85, both hemispheres 142.0
2010 Male, age 76, both hemispheres 138.9
2531 Female, age 67, both hemispheres 125.8
Entorhinal gyrus
nTPM: 135.4
2764 Male, age 80, right hemisphere 170.9
1938 Female, age 85, left hemisphere 147.5
1787 Male, age 76, left hemisphere 137.2
2613 Female, age 94, left hemisphere 125.0
2117 Female, age 91, right hemisphere 119.3
2686 Male, age 75, right hemisphere 112.6
Hippocampus, CA1
nTPM: 149.8
2749 Male, age 80, left hemisphere 196.6
2527 Male, age 74, both hemispheres 146.1
2082 Female, age 91, right hemisphere 143.0
1873 Female, age 85, both hemispheres 138.8
2045 Male, age 76, both hemispheres 124.5
Hippocampus, CA2
nTPM: 154.3
2249 Male, age 74, both hemispheres 246.3
1963 Male, age 80, left hemisphere 152.2
2437 Female, age 94, left hemisphere 133.4
1940 Female, age 85, left hemisphere 132.3
1892 Male, age 76, both hemispheres 131.9
2113 Female, age 91, right hemisphere 129.6
Hippocampus, CA3
nTPM: 174.0
2436 Male, age 74, both hemispheres 372.0
2137 Male, age 80, left hemisphere 165.9
2620 Female, age 94, left hemisphere 131.7
1867 Male, age 76, both hemispheres 126.8
2861 Female, age 67, both hemispheres 125.1
1891 Female, age 85, both hemispheres 122.4
Parahippocampal cortex
nTPM: 138.4
2245 Female, age 91, both hemispheres 158.2
1850 Male, age 80, both hemispheres 156.3
1933 Female, age 85, both hemispheres 151.8
2532 Female, age 72, left hemisphere 148.9
1990 Female, age 91, right hemisphere 145.2
2250 Female, age 67, right hemisphere 143.2
2622 Female, age 67, right hemisphere 126.7
2018 Male, age 76, both hemispheres 120.1
2693 Female, age 94, both hemispheres 119.1
2692 Male, age 74, both hemispheres 114.0
Perirhinal gyrus
nTPM: 155.0
1847 Female, age 91, left hemisphere 173.1
1794 Male, age 80, right hemisphere 167.0
1841 Female, age 85, right hemisphere 156.2
2521 Female, age 94, right hemisphere 144.7
2848 Male, age 76, right hemisphere 134.3
Subiculum
nTPM: 130.7
1977 Female, age 85, both hemispheres 150.6
1901 Male, age 80, both hemispheres 140.8
2438 Female, age 94, left hemisphere 134.9
2619 Male, age 74, both hemispheres 126.9
2042 Male, age 76, both hemispheres 117.0
2729 Female, age 91, right hemisphere 113.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 163.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 163.2
Samples: 197

Max nTPM: 468.9
Min nTPM: 54.2
Std nTPM: 69.8
Median nTPM: 149.8
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 468.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 456.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 407.8
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 350.8
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 326.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 324.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 300.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 295.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 290.2
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 289.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 288.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 319.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 319.8
FF:10169-103B7 60 years, female 417.4
FF:10153-102I9 76 years, female 222.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 161.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 161.3
Samples: 4

Max nTPM: 223.1
Min nTPM: 126.8
Sample A Female 223.1
Sample B Female 156.5
Sample C Male 138.6
Sample D Male 126.8
Entorhinal cortex
nTPM: 121.1
Samples: 4

Max nTPM: 138.6
Min nTPM: 107.8
Sample A Female 138.6
Sample B Female 114.8
Sample C Male 123.0
Sample D Male 107.8
Subiculum
nTPM: 123.0
Samples: 4

Max nTPM: 158.9
Min nTPM: 107.1
Sample A Female 158.9
Sample B Female 107.1
Sample C Male 107.8
Sample D Male 118.2
Ventral hippocampus
nTPM: 147.7
Samples: 4

Max nTPM: 177.3
Min nTPM: 83.9
Sample A Female 162.1
Sample B Female 83.9
Sample C Male 177.3
Sample D Male 167.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 451.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 414.4
Samples: 4

Max nTPM: 471.3
Min nTPM: 367.5
Sample A Male 367.5
Sample B Male 416.9
Sample C Female 401.8
Sample D Female 471.3
Hippocampal formation
nTPM: 451.3
Samples: 4

Max nTPM: 492.5
Min nTPM: 404.0
Sample A Male 439.3
Sample B Male 404.0
Sample C Female 469.3
Sample D Female 492.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.