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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:431.4 nTPM
HPA:431.4 nTPM
GTEx:809.4 nTPM
FANTOM5:249.6 Scaled Tags Per Million
Pig:41.8 nTPM
Mouse:485.5 nTPM
Allen mouse:15.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 431.4
Sample id Sample description nTPM
Hippocampus
nTPM: 431.4
2529 Female, age 94, left hemisphere 448.0
1898 Male, age 80, left hemisphere 441.7
1855 Male, age 76, left hemisphere 429.5
2621 Female, age 67, right hemisphere 427.9
1911 Female, age 85, right hemisphere 421.4
2148 Female, age 91, left hemisphere 419.7
Dentate gyrus
nTPM: 426.0
2530 Female, age 94, left hemisphere 460.0
2010 Male, age 76, both hemispheres 433.7
1927 Female, age 91, both hemispheres 422.7
2246 Female, age 85, both hemispheres 422.6
2531 Female, age 67, both hemispheres 418.0
2528 Male, age 74, both hemispheres 399.0
Entorhinal gyrus
nTPM: 423.2
2686 Male, age 75, right hemisphere 440.6
1787 Male, age 76, left hemisphere 430.6
2117 Female, age 91, right hemisphere 424.9
2764 Male, age 80, right hemisphere 422.4
1938 Female, age 85, left hemisphere 421.0
2613 Female, age 94, left hemisphere 399.5
Hippocampus, CA1
nTPM: 426.7
2749 Male, age 80, left hemisphere 431.9
2045 Male, age 76, both hemispheres 431.5
1873 Female, age 85, both hemispheres 425.5
2527 Male, age 74, both hemispheres 422.5
2082 Female, age 91, right hemisphere 422.2
Hippocampus, CA2
nTPM: 424.1
1892 Male, age 76, both hemispheres 435.3
1963 Male, age 80, left hemisphere 429.8
2437 Female, age 94, left hemisphere 429.1
1940 Female, age 85, left hemisphere 421.4
2249 Male, age 74, both hemispheres 417.4
2113 Female, age 91, right hemisphere 411.4
Hippocampus, CA3
nTPM: 412.5
1867 Male, age 76, both hemispheres 432.8
1891 Female, age 85, both hemispheres 423.1
2137 Male, age 80, left hemisphere 420.3
2861 Female, age 67, both hemispheres 406.2
2436 Male, age 74, both hemispheres 402.2
2620 Female, age 94, left hemisphere 390.6
Parahippocampal cortex
nTPM: 419.2
2018 Male, age 76, both hemispheres 440.0
1850 Male, age 80, both hemispheres 427.4
2245 Female, age 91, both hemispheres 425.2
1933 Female, age 85, both hemispheres 422.8
2532 Female, age 72, left hemisphere 422.0
2250 Female, age 67, right hemisphere 421.5
1990 Female, age 91, right hemisphere 416.1
2692 Male, age 74, both hemispheres 411.0
2622 Female, age 67, right hemisphere 404.9
2693 Female, age 94, both hemispheres 401.5
Perirhinal gyrus
nTPM: 426.3
1841 Female, age 85, right hemisphere 435.2
1794 Male, age 80, right hemisphere 433.7
1847 Female, age 91, left hemisphere 426.0
2848 Male, age 76, right hemisphere 423.0
2521 Female, age 94, right hemisphere 413.6
Subiculum
nTPM: 420.0
2042 Male, age 76, both hemispheres 429.0
1977 Female, age 85, both hemispheres 427.9
1901 Male, age 80, both hemispheres 427.1
2438 Female, age 94, left hemisphere 419.3
2729 Female, age 91, right hemisphere 411.6
2619 Male, age 74, both hemispheres 405.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 809.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 809.4
Samples: 197

Max nTPM: 1975.3
Min nTPM: 471.0
Std nTPM: 216.8
Median nTPM: 766.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1975.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1831.1
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 1476.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 1344.4
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 1343.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1321.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 1278.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 1278.6
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1249.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1185.9
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 1180.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 249.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 249.6
FF:10169-103B7 60 years, female 297.1
FF:10153-102I9 76 years, female 202.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 41.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 41.8
Samples: 4

Max nTPM: 50.7
Min nTPM: 34.4
Sample A Female 50.7
Sample B Female 38.7
Sample C Male 43.3
Sample D Male 34.4
Entorhinal cortex
nTPM: 37.1
Samples: 4

Max nTPM: 42.1
Min nTPM: 31.3
Sample A Female 36.1
Sample B Female 42.1
Sample C Male 38.7
Sample D Male 31.3
Subiculum
nTPM: 39.9
Samples: 4

Max nTPM: 53.1
Min nTPM: 34.2
Sample A Female 53.1
Sample B Female 36.8
Sample C Male 34.2
Sample D Male 35.5
Ventral hippocampus
nTPM: 37.9
Samples: 4

Max nTPM: 40.7
Min nTPM: 36.1
Sample A Female 40.7
Sample B Female 36.1
Sample C Male 37.0
Sample D Male 37.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 485.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 467.2
Samples: 4

Max nTPM: 507.4
Min nTPM: 433.4
Sample A Male 440.8
Sample B Male 487.2
Sample C Female 507.4
Sample D Female 433.4
Hippocampal formation
nTPM: 485.6
Samples: 4

Max nTPM: 561.3
Min nTPM: 446.9
Sample A Male 561.3
Sample B Male 454.5
Sample C Female 446.9
Sample D Female 479.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.8
69170150 Antisense, RP_050321_04_F12, Mouse strain C57BL/6J (56 days, male) 15.8

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