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S100A10
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:105.0 nTPM
HPA:105.0 nTPM
GTEx:95.2 nTPM
FANTOM5:112.1 Scaled Tags Per Million
Pig:18.0 nTPM
Mouse:71.5 nTPM
Allen mouse:1.1 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 105.0
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 63.4
1870 Female, age 42, unknown 74.3
2666 Male, age 74, left hemisphere 68.8
2411 Female, age 72, unknown 66.4
1830 Male, age 51, unknown 65.6
2828 Female, age 72, unknown 64.9
1827 Male, age 72, unknown 61.2
1833 Male, age 53, unknown 60.2
2019 Male, age 18, unknown 58.2
2586 Male, age 75, left hemisphere 57.8
2219 Male, age 76, both hemispheres 56.9
Dorsal raphe nucleus
nTPM: 99.1
2047 Male, age 72, unknown 123.2
1828 Male, age 53, unknown 119.3
2298 Female, age 72, unknown 92.8
2016 Female, age 72, unknown 91.6
2750 Male, age 76, both hemispheres 68.6
Inferior colliculus
nTPM: 62.1
2097 Female, age 72, unknown 66.7
1890 Male, age 53, unknown 62.0
1848 Female, age 42, unknown 60.5
2849 Male, age 72, unknown 59.2
Median raphe nucleus
nTPM: 86.7
2220 Male, age 76, midline 86.7
Pedunculopontine tegmental nucleus
nTPM: 76.6
2338 Male, age 61, both hemispheres 97.1
2334 Male, age 80, both hemispheres 73.4
1921 Female, age 85, both hemispheres 59.3
Periaquaductal grey, anterior
nTPM: 105.0
1947 Male, age 18, unknown 132.2
1795 Male, age 51, unknown 100.9
2502 Female, age 75, unknown 81.9
Periaquaductal grey, dorsal
nTPM: 78.1
2850 Male, age 76, both hemispheres 110.3
1831 Male, age 72, unknown 73.5
2464 Female, age 72, unknown 65.7
1840 Male, age 53, unknown 62.7
Periaquaductal grey, lateral
nTPM: 85.9
2272 Male, age 74, both hemispheres 93.8
2140 Male, age 76, both hemispheres 87.3
2053 Male, age 18, unknown 76.5
Pretectal area
nTPM: 70.8
2273 Male, age 74, both hemispheres 97.4
2825 Male, age 18, unknown 88.3
2224 Female, age 72, unknown 83.4
2667 Female, age 75, unknown 74.3
2407 Male, age 75, both hemispheres 74.2
2316 Male, age 76, right hemisphere 69.2
1817 Female, age 42, unknown 60.9
1944 Female, age 72, unknown 59.6
1816 Male, age 51, unknown 58.1
1815 Male, age 53, unknown 57.8
2007 Male, age 72, unknown 55.6
Red nucleus
nTPM: 79.2
1954 Female, age 42, unknown 108.0
1821 Female, age 72, unknown 98.1
1865 Male, age 51, unknown 97.9
2227 Male, age 72, unknown 83.9
2769 Male, age 72, unknown 82.6
1904 Male, age 53, unknown 82.1
2725 Female, age 75, unknown 74.4
2823 Male, age 76, right hemisphere 73.4
2503 Female, age 72, unknown 69.4
2588 Male, age 74, left hemisphere 61.5
2584 Male, age 75, left hemisphere 60.7
2785 Male, age 18, unknown 58.8
Substantia nigra
nTPM: 67.6
1941 Male, age 53, unknown 97.5
2590 Female, age 75, unknown 69.1
1851 Male, age 51, unknown 67.3
2699 Male, age 18, unknown 67.2
2665 Male, age 74, both hemispheres 66.8
2409 Female, age 72, unknown 63.2
1916 Female, age 42, unknown 62.2
2241 Male, age 72, unknown 61.6
1889 Female, age 72, unknown 61.3
2583 Male, age 75, right hemisphere 60.3
Superior colliculus
nTPM: 69.5
1995 Male, age 72, unknown 82.7
2587 Male, age 74, left hemisphere 80.2
1913 Female, age 42, unknown 78.3
2261 Male, age 18, unknown 74.2
2664 Male, age 75, both hemispheres 69.3
2668 Female, age 75, unknown 66.5
1796 Male, age 53, unknown 62.7
2087 Female, age 72, unknown 62.5
1839 Male, age 51, unknown 62.3
1895 Male, age 76, right hemisphere 56.2
Ventral tegmental area
nTPM: 77.7
2223 Female, age 72, unknown 86.7
1915 Female, age 42, unknown 81.6
1942 Male, age 51, unknown 79.7
2021 Male, age 53, unknown 78.0
2410 Female, age 72, unknown 70.4
2218 Male, age 76, both hemispheres 69.6

MIDBRAIN - GTEx RNA-seqi
Average nTPM 95.2
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 95.2
Samples: 139

Max nTPM: 295.4
Min nTPM: 25.3
Std nTPM: 50.5
Median nTPM: 85.0
GTEX-1F48J-0011-R2a-SM-CL535 50-59 years, female 295.4
GTEX-11DZ1-0011-R2a-SM-DNZZM 50-59 years, male 250.0
GTEX-Z93S-0011-R2a-SM-4RGNG 50-59 years, male 248.5
GTEX-1JMQK-0011-R2a-SM-EYYXQ 60-69 years, male 243.4
GTEX-1F75B-0011-R2a-SM-ARL8I 50-59 years, male 222.4
GTEX-13OVJ-0011-R2b-SM-5L3GP 50-59 years, female 206.8
GTEX-NPJ8-0011-R2a-SM-2TC6M 40-49 years, male 206.1
GTEX-NL4W-0011-R2a-SM-2I5GV 50-59 years, male 205.6
GTEX-1IGQW-0011-R2b-SM-D4P26 60-69 years, male 192.9
GTEX-14BIM-0011-R2b-SM-69LQ6 60-69 years, female 190.0
GTEX-1H3VE-0011-R2a-SM-CE6SA 40-49 years, male 184.7
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 112.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 112.1
FF:10158-103A5 76 years, female 112.1

MIDBRAIN - Pig RNA-seqi
Average nTPM 18.0
Pig sample Sample description nTPM
Midbrain
nTPM: 13.2
Samples: 4

Max nTPM: 24.1
Min nTPM: 8.4
Sample A Female 24.1
Sample B Female 11.4
Sample C Male 8.9
Sample D Male 8.4
Periaqueductal gray
nTPM: 13.0
Samples: 3

Max nTPM: 17.7
Min nTPM: 9.5
Sample B Female 9.5
Sample C Male 17.7
Sample D Male 11.9
Substantia nigra
nTPM: 16.7
Samples: 4

Max nTPM: 20.7
Min nTPM: 12.5
Sample A Female 20.7
Sample B Female 20.1
Sample C Male 13.6
Sample D Male 12.5
Superior colliculi
nTPM: 18.1
Samples: 4

Max nTPM: 32.7
Min nTPM: 10.6
Sample A Female 16.8
Sample B Female 32.7
Sample C Male 12.1
Sample D Male 10.6

MIDBRAIN - Mouse RNA-seqi
Average nTPM 71.5
Mouse sample Sample description nTPM
Midbrain
nTPM: 71.5
Samples: 4

Max nTPM: 78.8
Min nTPM: 68.3
Sample A Male 68.4
Sample B Male 68.3
Sample C Female 70.3
Sample D Female 78.8

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 1.1
70560277 Antisense, RP_050330_01_A11, Mouse strain C57BL/6J (56 days, male) 1.8
79760442 Antisense, RP_071204_02_E10, Mouse strain C57BL/6J (56 days, male) 0.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.