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IPO9
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:18.8 nTPM
HPA:18.8 nTPM
GTEx:17.9 nTPM
FANTOM5:21.8 Scaled Tags Per Million
Pig:49.2 nTPM
Mouse:35.5 nTPM
Allen mouse:9.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.8
Sample id Sample description nTPM
Hippocampus
nTPM: 16.7
2148 Female, age 91, left hemisphere 17.9
2621 Female, age 67, right hemisphere 17.6
1855 Male, age 76, left hemisphere 16.5
1898 Male, age 80, left hemisphere 16.4
1911 Female, age 85, right hemisphere 15.9
2529 Female, age 94, left hemisphere 15.7
Dentate gyrus
nTPM: 16.8
2528 Male, age 74, both hemispheres 18.5
2246 Female, age 85, both hemispheres 18.1
2531 Female, age 67, both hemispheres 17.8
1927 Female, age 91, both hemispheres 16.6
2530 Female, age 94, left hemisphere 15.5
2010 Male, age 76, both hemispheres 14.4
Entorhinal gyrus
nTPM: 17.7
2613 Female, age 94, left hemisphere 19.1
1938 Female, age 85, left hemisphere 18.7
2764 Male, age 80, right hemisphere 18.0
1787 Male, age 76, left hemisphere 17.6
2686 Male, age 75, right hemisphere 17.5
2117 Female, age 91, right hemisphere 15.4
Hippocampus, CA1
nTPM: 17.2
2749 Male, age 80, left hemisphere 18.4
2527 Male, age 74, both hemispheres 18.3
1873 Female, age 85, both hemispheres 18.0
2045 Male, age 76, both hemispheres 16.3
2082 Female, age 91, right hemisphere 14.8
Hippocampus, CA2
nTPM: 16.2
1892 Male, age 76, both hemispheres 17.4
2113 Female, age 91, right hemisphere 16.4
2437 Female, age 94, left hemisphere 16.3
1940 Female, age 85, left hemisphere 16.2
2249 Male, age 74, both hemispheres 15.4
1963 Male, age 80, left hemisphere 15.2
Hippocampus, CA3
nTPM: 17.8
2861 Female, age 67, both hemispheres 20.1
2620 Female, age 94, left hemisphere 19.6
2137 Male, age 80, left hemisphere 18.2
2436 Male, age 74, both hemispheres 16.8
1867 Male, age 76, both hemispheres 16.6
1891 Female, age 85, both hemispheres 15.4
Parahippocampal cortex
nTPM: 17.9
2692 Male, age 74, both hemispheres 20.7
2622 Female, age 67, right hemisphere 18.9
1850 Male, age 80, both hemispheres 18.8
2245 Female, age 91, both hemispheres 18.7
2693 Female, age 94, both hemispheres 18.0
2532 Female, age 72, left hemisphere 17.8
1990 Female, age 91, right hemisphere 17.6
1933 Female, age 85, both hemispheres 17.3
2250 Female, age 67, right hemisphere 17.1
2018 Male, age 76, both hemispheres 14.6
Perirhinal gyrus
nTPM: 18.8
1841 Female, age 85, right hemisphere 20.0
2521 Female, age 94, right hemisphere 20.0
2848 Male, age 76, right hemisphere 18.5
1847 Female, age 91, left hemisphere 18.2
1794 Male, age 80, right hemisphere 17.5
Subiculum
nTPM: 16.4
2438 Female, age 94, left hemisphere 19.8
2619 Male, age 74, both hemispheres 18.6
2729 Female, age 91, right hemisphere 16.5
1901 Male, age 80, both hemispheres 14.6
1977 Female, age 85, both hemispheres 14.6
2042 Male, age 76, both hemispheres 14.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.9
Samples: 197

Max nTPM: 29.3
Min nTPM: 6.7
Std nTPM: 3.9
Median nTPM: 17.6
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 29.3
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 28.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 28.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 27.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 27.0
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 26.7
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 26.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 25.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 25.3
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 25.2
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 24.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 21.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 21.8
FF:10153-102I9 76 years, female 34.2
FF:10169-103B7 60 years, female 9.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 49.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 41.5
Samples: 4

Max nTPM: 48.3
Min nTPM: 32.7
Sample A Female 48.3
Sample B Female 44.6
Sample C Male 40.2
Sample D Male 32.7
Entorhinal cortex
nTPM: 49.2
Samples: 4

Max nTPM: 55.4
Min nTPM: 42.6
Sample A Female 52.0
Sample B Female 46.8
Sample C Male 55.4
Sample D Male 42.6
Subiculum
nTPM: 47.5
Samples: 4

Max nTPM: 60.1
Min nTPM: 41.2
Sample A Female 60.1
Sample B Female 44.4
Sample C Male 44.3
Sample D Male 41.2
Ventral hippocampus
nTPM: 41.4
Samples: 4

Max nTPM: 52.4
Min nTPM: 30.6
Sample A Female 37.2
Sample B Female 30.6
Sample C Male 52.4
Sample D Male 45.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 35.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 35.5
Samples: 4

Max nTPM: 39.5
Min nTPM: 32.9
Sample A Male 35.0
Sample B Male 34.7
Sample C Female 32.9
Sample D Female 39.5
Hippocampal formation
nTPM: 32.7
Samples: 4

Max nTPM: 36.2
Min nTPM: 28.5
Sample A Male 31.7
Sample B Male 34.4
Sample C Female 36.2
Sample D Female 28.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.2
70278081 Antisense, RP_050531_02_D08, Mouse strain C57BL/6J (56 days, male) 9.2

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The Human Protein Atlas

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