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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:130.0 nTPM
HPA:130.0 nTPM
GTEx:185.4 nTPM
FANTOM5:70.9 Scaled Tags Per Million
Pig:14.2 nTPM
Mouse:168.7 nTPM
Allen mouse:14.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019601Antibody CAB008667
Glial cells LowNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 130.0
Sample id Sample description nTPM
Hippocampus
nTPM: 125.2
1898 Male, age 80, left hemisphere 140.6
2529 Female, age 94, left hemisphere 131.1
2148 Female, age 91, left hemisphere 124.9
2621 Female, age 67, right hemisphere 119.2
1911 Female, age 85, right hemisphere 119.1
1855 Male, age 76, left hemisphere 116.4
Dentate gyrus
nTPM: 125.0
2528 Male, age 74, both hemispheres 132.7
2530 Female, age 94, left hemisphere 130.1
2010 Male, age 76, both hemispheres 128.7
1927 Female, age 91, both hemispheres 123.4
2246 Female, age 85, both hemispheres 123.0
2531 Female, age 67, both hemispheres 111.8
Entorhinal gyrus
nTPM: 116.3
2117 Female, age 91, right hemisphere 125.2
1787 Male, age 76, left hemisphere 122.5
2764 Male, age 80, right hemisphere 119.8
1938 Female, age 85, left hemisphere 118.2
2686 Male, age 75, right hemisphere 106.3
2613 Female, age 94, left hemisphere 105.7
Hippocampus, CA1
nTPM: 130.0
2749 Male, age 80, left hemisphere 157.9
2527 Male, age 74, both hemispheres 133.3
1873 Female, age 85, both hemispheres 129.8
2082 Female, age 91, right hemisphere 115.2
2045 Male, age 76, both hemispheres 113.9
Hippocampus, CA2
nTPM: 124.2
1963 Male, age 80, left hemisphere 145.0
2249 Male, age 74, both hemispheres 137.4
2437 Female, age 94, left hemisphere 120.4
1892 Male, age 76, both hemispheres 115.5
2113 Female, age 91, right hemisphere 114.6
1940 Female, age 85, left hemisphere 112.3
Hippocampus, CA3
nTPM: 125.2
2436 Male, age 74, both hemispheres 145.9
2137 Male, age 80, left hemisphere 134.2
2620 Female, age 94, left hemisphere 120.6
1867 Male, age 76, both hemispheres 117.7
1891 Female, age 85, both hemispheres 117.6
2861 Female, age 67, both hemispheres 115.1
Parahippocampal cortex
nTPM: 111.2
1990 Female, age 91, right hemisphere 120.4
2250 Female, age 67, right hemisphere 118.4
2245 Female, age 91, both hemispheres 117.5
1933 Female, age 85, both hemispheres 115.6
2018 Male, age 76, both hemispheres 112.5
1850 Male, age 80, both hemispheres 110.3
2532 Female, age 72, left hemisphere 108.9
2622 Female, age 67, right hemisphere 105.5
2692 Male, age 74, both hemispheres 103.9
2693 Female, age 94, both hemispheres 99.1
Perirhinal gyrus
nTPM: 113.5
1794 Male, age 80, right hemisphere 119.6
1847 Female, age 91, left hemisphere 117.3
2521 Female, age 94, right hemisphere 114.2
1841 Female, age 85, right hemisphere 113.0
2848 Male, age 76, right hemisphere 103.5
Subiculum
nTPM: 117.0
1977 Female, age 85, both hemispheres 125.5
2729 Female, age 91, right hemisphere 119.3
2619 Male, age 74, both hemispheres 118.4
1901 Male, age 80, both hemispheres 118.2
2438 Female, age 94, left hemisphere 110.4
2042 Male, age 76, both hemispheres 110.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 185.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 185.4
Samples: 197

Max nTPM: 488.9
Min nTPM: 72.7
Std nTPM: 57.2
Median nTPM: 180.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 488.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 405.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 327.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 319.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 308.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 307.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 301.7
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 291.7
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 291.1
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 286.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 283.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 70.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 70.9
FF:10169-103B7 60 years, female 86.8
FF:10153-102I9 76 years, female 55.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.2
Samples: 4

Max nTPM: 17.5
Min nTPM: 12.2
Sample A Female 17.5
Sample B Female 13.0
Sample C Male 14.1
Sample D Male 12.2
Entorhinal cortex
nTPM: 12.7
Samples: 4

Max nTPM: 15.0
Min nTPM: 10.1
Sample A Female 11.2
Sample B Female 14.3
Sample C Male 15.0
Sample D Male 10.1
Subiculum
nTPM: 10.3
Samples: 4

Max nTPM: 10.9
Min nTPM: 10.0
Sample A Female 10.9
Sample B Female 10.0
Sample C Male 10.2
Sample D Male 10.2
Ventral hippocampus
nTPM: 13.0
Samples: 4

Max nTPM: 18.8
Min nTPM: 9.8
Sample A Female 11.3
Sample B Female 9.8
Sample C Male 18.8
Sample D Male 12.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 168.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 122.1
Samples: 4

Max nTPM: 130.4
Min nTPM: 106.4
Sample A Male 126.8
Sample B Male 124.6
Sample C Female 130.4
Sample D Female 106.4
Hippocampal formation
nTPM: 168.7
Samples: 4

Max nTPM: 179.5
Min nTPM: 158.1
Sample A Male 159.8
Sample B Male 158.1
Sample C Female 179.5
Sample D Female 177.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.3
641541 Antisense, RP_040914_01_F12, Mouse strain C57BL/6J (56 days, male) 14.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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