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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:43.4 nTPM
HPA:43.4 nTPM
GTEx:32.3 nTPM
FANTOM5:135.7 Scaled Tags Per Million
Pig:18.5 nTPM
Mouse:34.8 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044255
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 43.4
Sample id Sample description nTPM
Hippocampus
nTPM: 42.9
1911 Female, age 85, right hemisphere 46.4
1855 Male, age 76, left hemisphere 45.7
1898 Male, age 80, left hemisphere 44.1
2529 Female, age 94, left hemisphere 42.7
2621 Female, age 67, right hemisphere 39.8
2148 Female, age 91, left hemisphere 38.5
Dentate gyrus
nTPM: 42.6
2010 Male, age 76, both hemispheres 44.6
1927 Female, age 91, both hemispheres 44.4
2246 Female, age 85, both hemispheres 44.2
2530 Female, age 94, left hemisphere 41.7
2528 Male, age 74, both hemispheres 41.1
2531 Female, age 67, both hemispheres 39.5
Entorhinal gyrus
nTPM: 40.5
1938 Female, age 85, left hemisphere 44.4
2117 Female, age 91, right hemisphere 42.2
1787 Male, age 76, left hemisphere 41.6
2764 Male, age 80, right hemisphere 39.3
2613 Female, age 94, left hemisphere 38.5
2686 Male, age 75, right hemisphere 37.1
Hippocampus, CA1
nTPM: 41.7
1873 Female, age 85, both hemispheres 45.8
2749 Male, age 80, left hemisphere 42.3
2045 Male, age 76, both hemispheres 41.6
2527 Male, age 74, both hemispheres 39.8
2082 Female, age 91, right hemisphere 38.8
Hippocampus, CA2
nTPM: 42.4
1940 Female, age 85, left hemisphere 44.9
1892 Male, age 76, both hemispheres 44.5
2249 Male, age 74, both hemispheres 42.9
1963 Male, age 80, left hemisphere 41.1
2113 Female, age 91, right hemisphere 40.8
2437 Female, age 94, left hemisphere 40.3
Hippocampus, CA3
nTPM: 41.0
1891 Female, age 85, both hemispheres 45.4
2137 Male, age 80, left hemisphere 44.2
1867 Male, age 76, both hemispheres 43.4
2436 Male, age 74, both hemispheres 40.5
2620 Female, age 94, left hemisphere 36.9
2861 Female, age 67, both hemispheres 35.5
Parahippocampal cortex
nTPM: 42.2
1933 Female, age 85, both hemispheres 45.3
1850 Male, age 80, both hemispheres 45.1
2250 Female, age 67, right hemisphere 43.1
2693 Female, age 94, both hemispheres 43.1
2018 Male, age 76, both hemispheres 43.0
2245 Female, age 91, both hemispheres 42.1
1990 Female, age 91, right hemisphere 41.5
2532 Female, age 72, left hemisphere 40.0
2622 Female, age 67, right hemisphere 39.5
2692 Male, age 74, both hemispheres 39.1
Perirhinal gyrus
nTPM: 43.4
1794 Male, age 80, right hemisphere 44.4
1841 Female, age 85, right hemisphere 43.7
2521 Female, age 94, right hemisphere 43.5
2848 Male, age 76, right hemisphere 43.2
1847 Female, age 91, left hemisphere 42.3
Subiculum
nTPM: 42.9
2438 Female, age 94, left hemisphere 47.5
1901 Male, age 80, both hemispheres 44.0
2042 Male, age 76, both hemispheres 43.0
1977 Female, age 85, both hemispheres 41.9
2729 Female, age 91, right hemisphere 41.2
2619 Male, age 74, both hemispheres 40.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.3
Samples: 197

Max nTPM: 65.8
Min nTPM: 9.5
Std nTPM: 11.8
Median nTPM: 31.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 65.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 63.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 63.4
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 61.1
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 56.2
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 56.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 56.0
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 55.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 55.4
GTEX-13N2G-0011-R1b-SM-5MR3G 60-69 years, male 53.7
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 53.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 135.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 135.7
FF:10169-103B7 60 years, female 168.4
FF:10153-102I9 76 years, female 102.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.5
Samples: 4

Max nTPM: 23.7
Min nTPM: 11.9
Sample A Female 21.9
Sample B Female 16.5
Sample C Male 23.7
Sample D Male 11.9
Entorhinal cortex
nTPM: 15.7
Samples: 4

Max nTPM: 19.5
Min nTPM: 13.3
Sample A Female 14.1
Sample B Female 19.5
Sample C Male 15.9
Sample D Male 13.3
Subiculum
nTPM: 16.3
Samples: 4

Max nTPM: 18.7
Min nTPM: 14.2
Sample A Female 17.0
Sample B Female 14.2
Sample C Male 15.4
Sample D Male 18.7
Ventral hippocampus
nTPM: 15.3
Samples: 4

Max nTPM: 17.4
Min nTPM: 11.9
Sample A Female 16.1
Sample B Female 15.8
Sample C Male 11.9
Sample D Male 17.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 34.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.4
Samples: 4

Max nTPM: 34.0
Min nTPM: 26.2
Sample A Male 31.0
Sample B Male 34.0
Sample C Female 30.3
Sample D Female 26.2
Hippocampal formation
nTPM: 34.8
Samples: 4

Max nTPM: 39.8
Min nTPM: 30.4
Sample A Male 39.8
Sample B Male 30.4
Sample C Female 34.5
Sample D Female 34.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71612177 Antisense, RP_050927_02_C02, Mouse strain C57BL/6J (56 days, male) 0.0
70725573 Antisense, RP_050705_04_C12, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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